Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20690 Brassica napus
A08p35180 Brassica napus
Aa31LG5G8630 Aethionema arabicum
Aa31sc314G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3830 Anthoceros agrestis
Actinidia07284 Actinidia chinensis
Actinidia24258 Actinidia chinensis
Actinidia37501 Actinidia chinensis
Ah.15g092110 Amaranthus hybridus
AL1G18820 Arabidopsis lyrata
AL4G21100 Arabidopsis lyrata
Aqoxy2G00626 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JS7C8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3UIYI Arachis hypogaea
AT1G08410 Arabidopsis thaliana
AT2G27200 Arabidopsis thaliana
ATR0006G002 Amborella trichopoda
Atru.chr3.3098 Acer truncatum
Atru.chr3.3101 Acer truncatum
AUR62001563 Chenopodium quinoa
AUR62020220 Chenopodium quinoa
BcaB03g13337 Brassica carinata
BcaB06g28123 Brassica carinata
BcaC02g08272 Brassica carinata
BcaC07g38386 Brassica carinata
BcaC07g42533 Brassica carinata
BolC4t27178H Brassica oleracea
BolC8t48823H Brassica oleracea
BraA04t17642Z Brassica rapa
BraA08t35427Z Brassica rapa
C04p56520 Brassica napus
C08p11420 Brassica napus
CANSAT54G0076 Cannabis sativa
CARHR008290 Cardamine hirsuta
CARHR119700 Cardamine hirsuta
Carub.0001s0776 Capsella rubella
Carub.0004s0777 Capsella rubella
Ca_02972_v3 Cicer arietinum L.
CBR_g32036 Chara braunii
Cc01_g07790 Coffea canephora
CDE06G0259 Ceratophyllum demersum
Cfa010182 Carpinus fangiana
Cfa024445 Carpinus fangiana
Ciclev10028074m.g Citrus clementina
CiPaw.13G129100 Carya illinoinensis
ClCG01G010890 Citrullus lanatus
ClCG04G002140 Citrullus lanatus
COL.COLO4_25404 Corchorus olitorius
Cpa.g.sc103.19 Carica papaya
Cre16.g680944 Chlamydomonas reinhardtii
CsaV3_1G015690 Cucumis sativus L.
CsaV3_4G030600 Cucumis sativus L.
CSS0034246 Camellia sinensis var. sinensis
DCAR_006456 Daucus carota
Dinv18851 Davidia involucrata
Dinv33543 Davidia involucrata
Duzib168G1815 Durio zibethinus
Duzib170G0073 Durio zibethinus
ECA238G3826 Erigeron canadensis
EL10Ac7g16285 Beta vulgaris
Eucgr.J00579 Eucalyptus grandis
FAN11G2867 Fragaria x ananassa
FAN21G2899 Fragaria x ananassa
FAN25G3604 Fragaria x ananassa
FvH4_3g26290 Fragaria vesca
Glyma.07G176900 Glycine max
Glyma.11G175746 Glycine max
Glyma.12G095400 Glycine max
Glyma.12G189600 Glycine max
Glyma.13G312200 Glycine max
Gohir.A09G100300 Gossypium hirsutum
Gohir.D09G099700 Gossypium hirsutum
Gohir.D09G099733 Gossypium hirsutum
Gohir.D09G099766 Gossypium hirsutum
Gorai.006G116700 Gossypium raimondii
GSVIVG01037592001 Vitis vinifera
HanXRQChr14g0431711 Helianthus annuus
Haze_23572 Corylus avellana
Hma1.2p1_0101F.1_g049570 Hydrangea macrophylla
HPP92_017674 Vanilla planifolia
HPP92_017697 Vanilla planifolia
HPP92_017736 Vanilla planifolia
Hund18799 Selenicereus undatus
Lalb_Chr03g0028461 Lupinus albus
Lalb_Chr19g0136201 Lupinus albus
Lalb_Chr19g0136211 Lupinus albus
Lj2A953T33 Lonicera japonica
Lj2A953T34 Lonicera japonica
Lj3g0025777 Lotus japonicus
Lsat_1_v5_gn_2_35440 Lactuca sativa
Manes.04G062600 Manihot esculenta
Mapoly0045s0113 Marchantia polymorpha
MBI12_g38623_MAGBIO Magnolia biondii
MBI12_g38624_MAGBIO Magnolia biondii
MCO12G197 Micromonas commoda
MD05G1034700 Malus domestica
MD10G1037500 Malus domestica
Medtr4g050490 Medicago truncatula
MELO3C008925.2 Cucumis melo
MELO3C026106.2 Cucumis melo
Migut.G01069 Erythranthe guttata
Migut.N02439 Erythranthe guttata
MSTRG.17675 Avicennia marina
Nitab4.5_0002792g0050 Nicotiana tabacum
Nitab4.5_0007630g0020 Nicotiana tabacum
Nn6g34638 Nelumbo nucifera
Oeu051473.1 Olea europaea
Os12g0618300 Oryza sativa ssp. japonica
Peaxi162Scf00429g00122 Petunia axillaris
PGR119G1622 Punica granatum
PGSC0003DMG400003001 Solanum tuberosum
Phvul.011G099700 Phaseolus vulgaris
Potri.009G017000 Populus trichocarpa
Pp3c3_21040 Physcomitrium patens
PRCOL_00001880 Prasinoderma coloniale
Prupe.1G535500 Prunus persica
Psat7g204840 Pisum sativum
PSO339G1785 Papaver somniferum
PSO384G2941 Papaver somniferum
QL01p019440 Quercus lobata
RcHm_v2.0_Chr5g0048681 Rosa chinensis
Rhsim13G0196900 Rhododendron simsii
Sabra09G0009700 Salix brachista
SalBow3G3263 Salvia bowleyana
Sc21g0006750 Simmondsia chinensis
Sed0009678 Sechium edule
Sed0023260 Sechium edule
SEGI_23026 Sequoiadendron giganteum
SGA_v2.0_scaffold268G46203 Striga asiatica
SMO174G0010 Selaginella moellendorffii
Solyc11g071910.2 Solanum lycopersicum
Sopen11g029580 Solanum pennellii
Sp1g07060 Schrenkiella parvula
Sp4g10000 Schrenkiella parvula
TAR636G0458 Trochodendron aralioides
THA.LOC104826449 Tarenaya hassleriana
Thecc.09G271000 Theobroma cacao
Thhalv10001955m.g Eutrema salsugineum
Thhalv10007194m.g Eutrema salsugineum
TPR.G4623 Trifolium pratense
unitig_699.g19173 Utricularia gibba
vmacro03951 Vaccinium macrocarpon
VMungo1127G1842 Vigna mungo
Zm00001eb031980 Zea mays

User provided reference genes

Program Settings