Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p67570 Brassica napus
A10p03720 Brassica napus
Aa31LG1G19560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1692 Anthoceros agrestis
Actinidia09712 Actinidia chinensis
Ah.01g005000 Amaranthus hybridus
AL1G14950 Arabidopsis lyrata
Aqoxy1G03636 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9LRG3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BMD0WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9SY1C Arachis hypogaea
AT1G05190 Arabidopsis thaliana
ATR0752G019 Amborella trichopoda
Atru.chr1.450 Acer truncatum
Atru.chr6.3175 Acer truncatum
Atru.chr7.199 Acer truncatum
AUR62025126 Chenopodium quinoa
AUR62037130 Chenopodium quinoa
AUR62037131 Chenopodium quinoa
BcaB05g22264 Brassica carinata
BcaC03g14225 Brassica carinata
BcaC07g42148 Brassica carinata
BolC2t07645H Brassica oleracea
BolC5t29121H Brassica oleracea
BolC8t52725H Brassica oleracea
BraA02t05980Z Brassica rapa
BraA09t42090Z Brassica rapa
BraA10t42645Z Brassica rapa
C02p15280 Brassica napus
C05p03420 Brassica napus
C08p51940 Brassica napus
CAN.G575.51 Capsicum annuum
CANSAT64G1242 Cannabis sativa
CARHR004650 Cardamine hirsuta
CARHR004660 Cardamine hirsuta
Carub.0001s0446 Capsella rubella
Ca_27441_v3 Cicer arietinum L.
CBR_g40529 Chara braunii
Cc03_g16290 Coffea canephora
CDE05G1249 Ceratophyllum demersum
CDE05G1755 Ceratophyllum demersum
Cfa014413 Carpinus fangiana
Ciclev10016578m.g Citrus clementina
CiPaw.03G160500 Carya illinoinensis
ClCG02G001880 Citrullus lanatus
COL.COLO4_27703 Corchorus olitorius
Cpa.g.sc8.216 Carica papaya
Cre09.g415950 Chlamydomonas reinhardtii
CsaV3_7G003660 Cucumis sativus L.
CSS0021360 Camellia sinensis var. sinensis
CSS0042137 Camellia sinensis var. sinensis
CSS0044404 Camellia sinensis var. sinensis
DCAR_019767 Daucus carota
Dinv05442 Davidia involucrata
Duzib251G0293 Durio zibethinus
ECA234G2016 Erigeron canadensis
EL10Ac9g20979 Beta vulgaris
Eucgr.A01711 Eucalyptus grandis
FAN02G0543 Fragaria x ananassa
FAN02G2679 Fragaria x ananassa
FAN05G0628 Fragaria x ananassa
FAN14G5807 Fragaria x ananassa
FvH4_6g43280 Fragaria vesca
Glyma.09G138400 Glycine max
Glyma.16G189100 Glycine max
Gohir.A13G094300 Gossypium hirsutum
Gohir.D13G088300 Gossypium hirsutum
Gorai.013G101000 Gossypium raimondii
GSVIVG01030599001 Vitis vinifera
HanXRQChr10g0305801 Helianthus annuus
Haze_12873 Corylus avellana
Haze_27389 Corylus avellana
Hma1.2p1_1748F.1_g300670 Hydrangea macrophylla
HPP92_004133 Vanilla planifolia
Hund22246 Selenicereus undatus
Lalb_Chr01g0009331 Lupinus albus
Lalb_Chr03g0034571 Lupinus albus
Lj2g0022309 Lotus japonicus
Lj8A125T69 Lonicera japonica
Lsat_1_v5_gn_5_125300 Lactuca sativa
Lsat_1_v5_gn_5_33001 Lactuca sativa
Manes.12G075000 Manihot esculenta
Mapoly0005s0245 Marchantia polymorpha
MBI02_g15249_MAGBIO Magnolia biondii
MBI02_g28342_MAGBIO Magnolia biondii
MCO03G488 Micromonas commoda
MD09G1107800 Malus domestica
MD09G1108400 Malus domestica
MD17G1096300 Malus domestica
Medtr0316s0010 Medicago truncatula
MELO3C018813.2 Cucumis melo
Migut.H00629 Erythranthe guttata
MSTRG.23886 Avicennia marina
Nitab4.5_0001925g0020 Nicotiana tabacum
Nitab4.5_0008178g0020 Nicotiana tabacum
Nitab4.5_0010082g0050 Nicotiana tabacum
Nn1g01949 Nelumbo nucifera
Nn3g19321 Nelumbo nucifera
Os03g0356300 Oryza sativa ssp. japonica
Os03g0751400 Oryza sativa ssp. japonica
Peaxi162Scf00062g01418 Petunia axillaris
PGR042G1696 Punica granatum
PGSC0003DMG401023851 Solanum tuberosum
Phvul.004G116200 Phaseolus vulgaris
Potri.002G229325 Populus trichocarpa
Potri.002G229350 Populus trichocarpa
Potri.014G153000 Populus trichocarpa
Pp3s128_40 Physcomitrium patens
PRCOL_00003594 Prasinoderma coloniale
Prupe.1G100300 Prunus persica
Psat1g066560 Pisum sativum
PSO210G1973 Papaver somniferum
PSO832G4463 Papaver somniferum
QL07p005233 Quercus lobata
RcHm_v2.0_Chr2g0159551 Rosa chinensis
Rhsim06G0161200 Rhododendron simsii
Sabra14G0115900 Salix brachista
SalBow1G4279 Salvia bowleyana
Sc06g0009540 Simmondsia chinensis
Sed0014516 Sechium edule
Sed0015264 Sechium edule
SEGI_26152 Sequoiadendron giganteum
SEGI_28076 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19164 Striga asiatica
SMO169G0123 Selaginella moellendorffii
SMO347G0080 Selaginella moellendorffii
Solyc12g100160.3 Solanum lycopersicum
Sopen12g034790 Solanum pennellii
Sp1g04040 Schrenkiella parvula
SpUn0024_0100 Schrenkiella parvula
TAR624G1336 Trochodendron aralioides
TAR626G0760 Trochodendron aralioides
THA.LOC104800989 Tarenaya hassleriana
THA.LOC104826153 Tarenaya hassleriana
Thecc.02G313800 Theobroma cacao
Thhalv10008693m.g Eutrema salsugineum
TPR.G8169 Trifolium pratense
TWI18G1280 Tripterygium wilfordii
TWI36G0046 Tripterygium wilfordii
unitig_62.g23382 Utricularia gibba
vmacro12207 Vaccinium macrocarpon
vmacro20205 Vaccinium macrocarpon
VMungo0464G0253 Vigna mungo
Zm00001eb017180 Zea mays
Zm00001eb394520 Zea mays

User provided reference genes

Program Settings