Gene: Solyc12g100160.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g100160.3
  • Transcript Identifier Solyc12g100160.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 66524683-66528852 : positive

Gene Family Information

  • ID HOM05D002235
  • #Genes/#Species 301/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g100160.3.1
  • uniprot A0A3Q7JYX1
  • gene_id Solyc12g100160

Descriptions

  • Description 50S ribosomal protein L6 (AHRD V3.3 *** A0A2G2YBF1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G05190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G05190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G05190
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G05190
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G05190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036789 Ribosomal protein L6, alpha-beta domain superfamily
IPR020040 Ribosomal protein L6, alpha-beta domain
IPR000702 Ribosomal protein L6
IPR019906 Ribosomal protein L6, bacterial-type
Mapman id Description
17.7.2.1.6 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL6