Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p32130 Brassica napus
Aa31LG5G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis
Actinidia40389 Actinidia chinensis
Ah.05g173200 Amaranthus hybridus
AL6G53500 Arabidopsis lyrata
AL8G42840 Arabidopsis lyrata
Aqoxy3G02773 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea
AT4G01710 Arabidopsis thaliana
AT5G65274 Arabidopsis thaliana
ATR0057G123 Amborella trichopoda
Atru.chr5.161 Acer truncatum
AUR62013728 Chenopodium quinoa
AUR62023426 Chenopodium quinoa
BcaC03g18322 Brassica carinata
BolC3t18340H Brassica oleracea
BraA06t26141Z Brassica rapa
C03p60810 Brassica napus
CAN.G362.11 Capsicum annuum
CARHR248040 Cardamine hirsuta
Carub.0006s3721 Capsella rubella
Carub.0008s2615 Capsella rubella
Ca_14055_v3 Cicer arietinum L.
Cc02_g24910 Coffea canephora
CDE02G2422 Ceratophyllum demersum
CDE11G0478 Ceratophyllum demersum
Cfa011089 Carpinus fangiana
Ciclev10029559m.g Citrus clementina
CiPaw.13G027900 Carya illinoinensis
CiPaw.14G021600 Carya illinoinensis
ClCG11G006910 Citrullus lanatus
COL.COLO4_12428 Corchorus olitorius
Cpa.g.sc101.28 Carica papaya
CsaV3_6G001140 Cucumis sativus L.
CSS0048126 Camellia sinensis var. sinensis
Dinv44074 Davidia involucrata
Duzib138G0976 Durio zibethinus
ECA234G3101 Erigeron canadensis
EL10Ac1g00782 Beta vulgaris
Eucgr.C04409 Eucalyptus grandis
Eucgr.E00550 Eucalyptus grandis
Eucgr.E01576 Eucalyptus grandis
Eucgr.E02797 Eucalyptus grandis
Eucgr.E04335 Eucalyptus grandis
Eucgr.H02816 Eucalyptus grandis
Eucgr.J01375 Eucalyptus grandis
Eucgr.J01567 Eucalyptus grandis
Eucgr.L02413 Eucalyptus grandis
FAN01G3136 Fragaria x ananassa
FAN03G0006 Fragaria x ananassa
FAN03G2425 Fragaria x ananassa
FAN06G2047 Fragaria x ananassa
FAN06G2910 Fragaria x ananassa
FAN10G0506 Fragaria x ananassa
FAN10G2714 Fragaria x ananassa
FvH4_7g09830 Fragaria vesca
Glyma.03G114200 Glycine max
Glyma.07G112500 Glycine max
Gohir.A11G020500 Gossypium hirsutum
Gohir.A12G096500 Gossypium hirsutum
Gohir.A13G167950 Gossypium hirsutum
Gohir.D01G155933 Gossypium hirsutum
Gohir.D11G020200 Gossypium hirsutum
Gohir.D12G099300 Gossypium hirsutum
Gorai.002G193300 Gossypium raimondii
Gorai.007G021500 Gossypium raimondii
Gorai.008G108000 Gossypium raimondii
GSVIVG01018248001 Vitis vinifera
HanXRQChr05g0138471 Helianthus annuus
HanXRQChr16g0520301 Helianthus annuus
Haze_02808 Corylus avellana
HPP92_009947 Vanilla planifolia
Hund07697 Selenicereus undatus
Hund11691 Selenicereus undatus
Hund17078 Selenicereus undatus
Lalb_Chr07g0195501 Lupinus albus
Lalb_Chr13g0304521 Lupinus albus
Lalb_Chr13g0304531 Lupinus albus
Lalb_Chr13g0304551 Lupinus albus
Lalb_Chr13g0304581 Lupinus albus
Lalb_Chr13g0304591 Lupinus albus
Lj3g0015662 Lotus japonicus
Lsat_1_v5_gn_4_46700 Lactuca sativa
Manes.01G272200 Manihot esculenta
Manes.05G053000 Manihot esculenta
Mapoly0006s0266 Marchantia polymorpha
MBI04_g34109_MAGBIO Magnolia biondii
MD02G1216700 Malus domestica
MD07G1103100 Malus domestica
MD07G1103500 Malus domestica
MD15G1416400 Malus domestica
Medtr1g112900 Medicago truncatula
Medtr8g006725 Medicago truncatula
MELO3C008212.2 Cucumis melo
Migut.A00726 Erythranthe guttata
Migut.B01551 Erythranthe guttata
MSTRG.20701 Avicennia marina
Nitab4.5_0002874g0020 Nicotiana tabacum
Nitab4.5_0003553g0110 Nicotiana tabacum
Nitab4.5_0029376g0010 Nicotiana tabacum
Nn1g00897 Nelumbo nucifera
Nn6g33850 Nelumbo nucifera
Oeu064660.1 Olea europaea
Os11g0557900 Oryza sativa ssp. japonica
Peaxi162Scf00030g00515 Petunia axillaris
PGR042G1446 Punica granatum
PGSC0003DMG400026042 Solanum tuberosum
Phvul.010G052100 Phaseolus vulgaris
Potri.002G136500 Populus trichocarpa
Potri.014G045200 Populus trichocarpa
Pp3c15_3940 Physcomitrium patens
Prupe.2G127400 Prunus persica
Psat0s118g0040 Pisum sativum
PSO063G1454 Papaver somniferum
PSO782G3280 Papaver somniferum
QL04p030930 Quercus lobata
RcHm_v2.0_Chr1g0346991 Rosa chinensis
Sabra14G0033100 Salix brachista
SalBow5G0414 Salvia bowleyana
SalBow7G0891 Salvia bowleyana
Sc02g0003030 Simmondsia chinensis
Sed0016493 Sechium edule
Sed0016496 Sechium edule
SEGI_29435 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36917 Striga asiatica
SGA_v2.0_scaffold52G19215 Striga asiatica
SMO203G0150 Selaginella moellendorffii
Solyc01g090450.3 Solanum lycopersicum
Sopen01g036240 Solanum pennellii
Sp2g28380 Schrenkiella parvula
TAR374G1117 Trochodendron aralioides
THA.LOC104814071 Tarenaya hassleriana
Thecc.01G392500 Theobroma cacao
Thhalv10005116m.g Eutrema salsugineum
TPR.G33121 Trifolium pratense
TPR.G6976 Trifolium pratense
TWI14G0708 Tripterygium wilfordii
TWI14G1050 Tripterygium wilfordii
TWI59G1443 Tripterygium wilfordii
unitig_0.g1324 Utricularia gibba
vmacro13485 Vaccinium macrocarpon
VMungo0331G0261 Vigna mungo
Zm00001eb201920 Zea mays

User provided reference genes

Program Settings