Gene: AT5G65274

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65274
  • Transcript Identifier AT5G65274.1
  • Gene Type Coding gene
  • Location Chr5 : 26085300-26085960 : positive

Gene Family Information

  • ID HOM05D005128
  • #Genes/#Species 146/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65274.1
  • uniprot B3H6Y2

Descriptions

  • Description ARP2/3 complex 16 kDa subunit (p16-Arc)
  • Computational description ARP2/3 complex 16 kDa subunit (p16-Arc); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of actin filament polymerization; LOCATED IN: cytoskeleton; CONTAINS InterPro DOMAIN/s: ARP2/3 complex 16kDa subunit (p16-Arc) (InterPro:IPR006789); BEST Arabidopsis thaliana protein match is: ARP2/3 complex 16 kDa subunit (p16-Arc) (TAIR:AT4G01710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034314
IEA
GOA DatabaseArp2/3 complex-mediated actin nucleation
GO:0034314
IBA
Gene OntologyArp2/3 complex-mediated actin nucleation1
GO:0034314
IEA
InterProArp2/3 complex-mediated actin nucleation
GO:0030036
ISO
PLAZA Integrative Orthologyactin cytoskeleton organization AT4G01710
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT4G01710
GO:0007015
ISO
PLAZA Integrative Orthologyactin filament organization AT4G01710
GO:0030041
ISO
PLAZA Integrative Orthologyactin filament polymerization AT4G01710
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT4G01710
GO:0030833
IEA
GOA Databaseregulation of actin filament polymerization
GO:0030833
IEA
InterProregulation of actin filament polymerization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
GOA Databaseactin binding
GO:0051015
IBA
Gene Ontologyactin filament binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015629
IEA
GOA Databaseactin cytoskeleton
GO:0015629
IEA
InterProactin cytoskeleton
GO:0005885
IEA
GOA DatabaseArp2/3 protein complex
GO:0005885
IBA
Gene OntologyArp2/3 protein complex1
GO:0005885
IEA
InterProArp2/3 protein complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0042995
IEA
GOA Databasecell projection
GO:0005856
IEA
GOA Databasecytoskeleton

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036743 Actin-related protein 2/3 complex subunit 5 superfamily
IPR006789 Actin-related protein 2/3 complex subunit 5
Mapman id Description
20.2.2.1.7 Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component ArpC5