Gene: Solyc01g090450.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g090450.3
- Transcript Identifier Solyc01g090450.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 76368296-76373350 : positive
Gene Family Information
- ID HOM05D005128
- #Genes/#Species 146/89
- Phylogenetic origin
- ID ORTHO05D006227
- #Genes/#Species 146/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g090450.3.1
- uniprot A0A3Q7EJV8
- gene_id Solyc01g090450
Descriptions
- Description Actin-related protein 2/3 complex subunit 5 (AHRD V3.3 *** A0A1U8EEJ8_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030036 | ISO | PLAZA Integrative Orthology | actin cytoskeleton organization | AT4G01710 |
| GO:0010090 | ISO | PLAZA Integrative Orthology | trichome morphogenesis | AT4G01710 |
| GO:0007015 | ISO | PLAZA Integrative Orthology | actin filament organization | AT4G01710 |
| GO:0030041 | ISO | PLAZA Integrative Orthology | actin filament polymerization | AT4G01710 |
| GO:0009825 | ISO | PLAZA Integrative Orthology | multidimensional cell growth | AT4G01710 |
| GO:0034314 | IBA IEA | GOA Database | Arp2/3 complex-mediated actin nucleation | |
| GO:0034314 | IEA | InterPro | Arp2/3 complex-mediated actin nucleation | |
| GO:0030833 | IEA | GOA Database | regulation of actin filament polymerization | |
| GO:0030833 | IEA | InterPro | regulation of actin filament polymerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051015 | IBA | GOA Database | actin filament binding | |
| GO:0003779 | ISO | PLAZA Integrative Orthology | actin binding | AT4G01710 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA IEA | GOA Database | cytoplasm | |
| GO:0005885 | IBA IEA | GOA Database | Arp2/3 protein complex | |
| GO:0005885 | IEA | InterPro | Arp2/3 protein complex | |
| GO:0015629 | IEA | GOA Database | actin cytoskeleton | |
| GO:0015629 | IEA | InterPro | actin cytoskeleton | |
| GO:0005856 | IEA | GOA Database | cytoskeleton |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.2.2.1.7 | Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component ArpC5 |