Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12910 Brassica napus
A10p17910 Brassica napus
Aa31sc36G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3468 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4914 Anthoceros agrestis
Actinidia40404 Actinidia chinensis
Ah.09g230150 Amaranthus hybridus
Ah.14g083650 Amaranthus hybridus
AL8G33250 Arabidopsis lyrata
Aqoxy3G03862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2H7I9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FB81IM Arachis hypogaea
AT5G57280 Arabidopsis thaliana
ATR0561G198 Amborella trichopoda
Atru.chr12.1677 Acer truncatum
AUR62021333 Chenopodium quinoa
AUR62033248 Chenopodium quinoa
BcaB05g22331 Brassica carinata
BcaC03g14169 Brassica carinata
BolC2t07566H Brassica oleracea
BolC3t13949H Brassica oleracea
BraA03t10599Z Brassica rapa
C02p14420 Brassica napus
C03p15070 Brassica napus
CAN.G65.105 Capsicum annuum
CAN.G65.73 Capsicum annuum
CANSAT21G0708 Cannabis sativa
CANSAT56G1932 Cannabis sativa
CANSAT78G0037 Cannabis sativa
CANSAT78G0098 Cannabis sativa
CANSAT78G0925 Cannabis sativa
CANSAT78G1079 Cannabis sativa
CANSAT78G1648 Cannabis sativa
CANSAT78G2262 Cannabis sativa
CARHR271080 Cardamine hirsuta
Carub.0008s1778 Capsella rubella
Ca_21245_v3 Cicer arietinum L.
CBR_g3667 Chara braunii
Cc09_g07700 Coffea canephora
CDE02G0278 Ceratophyllum demersum
CDE06G0833 Ceratophyllum demersum
Cfa005486 Carpinus fangiana
Cfa013429 Carpinus fangiana
Cfa026974 Carpinus fangiana
Ciclev10009088m.g Citrus clementina
CiPaw.08G034000 Carya illinoinensis
ClCG11G007510 Citrullus lanatus
COL.COLO4_23558 Corchorus olitorius
Cpa.g.sc95.31 Carica papaya
Cre09.g398104 Chlamydomonas reinhardtii
CsaV3_5G008380 Cucumis sativus L.
CSS0004658 Camellia sinensis var. sinensis
CSS0020745 Camellia sinensis var. sinensis
DCAR_019823 Daucus carota
Dinv25402 Davidia involucrata
Dinv26445 Davidia involucrata
Duzib170G0185 Durio zibethinus
ECA236G3126 Erigeron canadensis
EL10Ac8g18319 Beta vulgaris
Eucgr.C02260 Eucalyptus grandis
Eucgr.L02823 Eucalyptus grandis
FAN07G0604 Fragaria x ananassa
FAN12G4072 Fragaria x ananassa
FAN17G1447 Fragaria x ananassa
FAN22G1351 Fragaria x ananassa
FvH4_4g07620 Fragaria vesca
Glyma.13G099200 Glycine max
Glyma.17G060900 Glycine max
Gohir.A08G018100 Gossypium hirsutum
Gohir.D08G028700 Gossypium hirsutum
Gorai.004G025800 Gossypium raimondii
GSVIVG01006242001 Vitis vinifera
GSVIVG01010906001 Vitis vinifera
HanXRQChr06g0179561 Helianthus annuus
Haze_21974 Corylus avellana
Haze_27417 Corylus avellana
Hund26318 Selenicereus undatus
Lalb_Chr07g0180591 Lupinus albus
Lj3g0011551 Lotus japonicus
Lj3g0017980 Lotus japonicus
Lj5C681T1 Lonicera japonica
Lj7C624G8 Lonicera japonica
Manes.06G021200 Manihot esculenta
Mapoly0020s0093 Marchantia polymorpha
MBI13_g31549_MAGBIO Magnolia biondii
MCO01G124 Micromonas commoda
MCO02G313 Micromonas commoda
MD13G1245300 Malus domestica
MD16G1253000 Malus domestica
Medtr4g007390 Medicago truncatula
Medtr4g007420 Medicago truncatula
Medtr4g127640 Medicago truncatula
MELO3C008596.2 Cucumis melo
MELO3C008923.2 Cucumis melo
Migut.D01496 Erythranthe guttata
MSTRG.4318 Avicennia marina
Nitab4.5_0000033g0380 Nicotiana tabacum
Nitab4.5_0000339g0120 Nicotiana tabacum
Nitab4.5_0000782g0050 Nicotiana tabacum
Nitab4.5_0003040g0070 Nicotiana tabacum
Nn8g40987 Nelumbo nucifera
Oeu016123.1 Olea europaea
Oeu038397.1 Olea europaea
Os02g0804300 Oryza sativa ssp. japonica
Peaxi162Scf00171g00233 Petunia axillaris
Peaxi162Scf03693g00003 Petunia axillaris
PGR044G0126 Punica granatum
PGSC0003DMG400027051 Solanum tuberosum
Phvul.003G141775 Phaseolus vulgaris
Potri.001G338700 Populus trichocarpa
Potri.018G049800 Populus trichocarpa
Pp3c12_7620 Physcomitrium patens
PRCOL_00001013 Prasinoderma coloniale
Prupe.1G079400 Prunus persica
Psat0s4042g0040 Pisum sativum
PSO210G0218 Papaver somniferum
PSO210G2992 Papaver somniferum
PSO210G4717 Papaver somniferum
QL11p004818 Quercus lobata
RcHm_v2.0_Chr4g0400231 Rosa chinensis
Rhsim12G0146500 Rhododendron simsii
Sabra03G0001500 Salix brachista
Sabra03G0004700 Salix brachista
SalBow8G1532 Salvia bowleyana
Sc14g0001390 Simmondsia chinensis
Sed0003098 Sechium edule
SEGI_20363 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39079 Striga asiatica
SGA_v2.0_scaffold36G14352 Striga asiatica
SMO367G1042 Selaginella moellendorffii
Solyc06g072250.3 Solanum lycopersicum
Sopen06g028570 Solanum pennellii
Sp6g19010 Schrenkiella parvula
TAR383G0389 Trochodendron aralioides
TAR383G0746 Trochodendron aralioides
TAR626G0361 Trochodendron aralioides
THA.LOC104817784 Tarenaya hassleriana
Thecc.09G180400 Theobroma cacao
Thhalv10014295m.g Eutrema salsugineum
TPR.G26767 Trifolium pratense
TPR.G5373 Trifolium pratense
TWI36G0301 Tripterygium wilfordii
TWI75G1515 Tripterygium wilfordii
unitig_26.g9274 Utricularia gibba
vmacro16466 Vaccinium macrocarpon
VMungo1215G0063 Vigna mungo
Zm00001eb258180 Zea mays

User provided reference genes

Program Settings