Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13560 Brassica napus
Aa31LG5G10990 Aethionema arabicum
Actinidia05910 Actinidia chinensis
Actinidia30887 Actinidia chinensis
Ah.12g062600 Amaranthus hybridus
AL2G11870 Arabidopsis lyrata
AL2G11920 Arabidopsis lyrata
AL2G11950 Arabidopsis lyrata
AL3G10280 Arabidopsis lyrata
Aqoxy3G01501 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BV4TL7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7CGDJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWM3ME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZYW0T Arachis hypogaea
AT1G63290 Arabidopsis thaliana
AT3G01850 Arabidopsis thaliana
ATR0561G092 Amborella trichopoda
Atru.chr6.2534 Acer truncatum
AUR62018151 Chenopodium quinoa
AUR62042564 Chenopodium quinoa
BcaB02g08607 Brassica carinata
BcaB08g35694 Brassica carinata
BcaC04g22707 Brassica carinata
C09p16070 Brassica napus
CAN.G1207.6 Capsicum annuum
CANSAT64G1027 Cannabis sativa
CARHR048130 Cardamine hirsuta
CARHR075080 Cardamine hirsuta
Carub.0002s0154 Capsella rubella
Ca_02257_v3 Cicer arietinum L.
Ca_26860_v3 Cicer arietinum L.
CBR_g32434 Chara braunii
Cc00_g29730 Coffea canephora
Cc00_g30800 Coffea canephora
CDE02G2761 Ceratophyllum demersum
Ciclev10016576m.g Citrus clementina
CiPaw.04G035300 Carya illinoinensis
ClCG11G007010 Citrullus lanatus
COL.COLO4_17170 Corchorus olitorius
Cpa.g.sc171.31 Carica papaya
Cre02.g116450 Chlamydomonas reinhardtii
CsaV3_2G034200 Cucumis sativus L.
CSS0013884 Camellia sinensis var. sinensis
DCAR_021771 Daucus carota
DCAR_021774 Daucus carota
Dinv25670 Davidia involucrata
Dinv33352 Davidia involucrata
Duzib147G0482 Durio zibethinus
Duzib187G0529 Durio zibethinus
ECA232G1712 Erigeron canadensis
EL10Ac2g03081 Beta vulgaris
Eucgr.I01657 Eucalyptus grandis
FAN02G0458 Fragaria x ananassa
FAN05G5252 Fragaria x ananassa
FAN09G4710 Fragaria x ananassa
FAN14G0887 Fragaria x ananassa
FAN14G3745 Fragaria x ananassa
FvH4_6g53180 Fragaria vesca
FvH4_6g53340 Fragaria vesca
Glyma.16G059000 Glycine max
Glyma.19G088400 Glycine max
Gohir.A07G226900 Gossypium hirsutum
Gohir.A10G159500 Gossypium hirsutum
Gohir.D07G234100 Gossypium hirsutum
Gohir.D10G084500 Gossypium hirsutum
Gorai.001G269600 Gossypium raimondii
Gorai.011G091900 Gossypium raimondii
GSVIVG01001810001 Vitis vinifera
HanXRQChr01g0003571 Helianthus annuus
HanXRQChr01g0007981 Helianthus annuus
HanXRQChr06g0179181 Helianthus annuus
HanXRQChr09g0256131 Helianthus annuus
HanXRQChr10g0294971 Helianthus annuus
Haze_14855 Corylus avellana
Haze_26206 Corylus avellana
Hma1.2p1_0049F.1_g028350 Hydrangea macrophylla
Hma1.2p1_1278F.1_g272430 Hydrangea macrophylla
HPP92_003198 Vanilla planifolia
Hund03352 Selenicereus undatus
Lalb_Chr14g0363251 Lupinus albus
Lalb_Chr24g0403361 Lupinus albus
Lj1g0004245 Lotus japonicus
Lj7A608T48 Lonicera japonica
Lju41A51T48 Lonicera japonica
Lju41C51T14 Lonicera japonica
Lsat_1_v5_gn_7_5841 Lactuca sativa
Manes.15G159200 Manihot esculenta
Manes.17G104200 Manihot esculenta
Mapoly0209s0004 Marchantia polymorpha
MBI11_g07446_MAGBIO Magnolia biondii
MCO07G630 Micromonas commoda
MCO11G321 Micromonas commoda
MD09G1013300 Malus domestica
MD17G1014000 Malus domestica
Medtr3g449340 Medicago truncatula
Medtr7g029630 Medicago truncatula
MELO3C008202.2 Cucumis melo
Migut.K01454 Erythranthe guttata
MSTRG.3084 Avicennia marina
MSTRG.3263 Avicennia marina
Nitab4.5_0000703g0040 Nicotiana tabacum
Nitab4.5_0004485g0060 Nicotiana tabacum
Nn4g22362 Nelumbo nucifera
Oeu013646.2 Olea europaea
Os09g0505700 Oryza sativa ssp. japonica
Peaxi162Scf00541g00613 Petunia axillaris
PGR142G0429 Punica granatum
PGSC0003DMG400023059 Solanum tuberosum
Phvul.001G095400 Phaseolus vulgaris
Potri.001G332700 Populus trichocarpa
Pp3c18_13640 Physcomitrium patens
PRCOL_00001251 Prasinoderma coloniale
Prupe.3G303800 Prunus persica
Psat3g176560 Pisum sativum
PSO017G6202 Papaver somniferum
PSO170G1634 Papaver somniferum
PSO170G2498 Papaver somniferum
PSO478G3476 Papaver somniferum
QL02p071808 Quercus lobata
RcHm_v2.0_Chr2g0175221 Rosa chinensis
Rhsim10G0007500 Rhododendron simsii
Sabra16G0213500 Salix brachista
SalBow4G1208 Salvia bowleyana
SalBow4G2075 Salvia bowleyana
Sc09g0003450 Simmondsia chinensis
Sed0004149 Sechium edule
SEGI_14315 Sequoiadendron giganteum
SEGI_35316 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07199 Striga asiatica
SGA_v2.0_scaffold44G16906 Striga asiatica
SHI03903 Sapria himalayana
SMO358G0518 Selaginella moellendorffii
Solyc05g007260.3 Solanum lycopersicum
Sopen05g003220 Solanum pennellii
Sp2g01240 Schrenkiella parvula
TAR133G0005 Trochodendron aralioides
TAR629G1214 Trochodendron aralioides
THA.LOC104819103 Tarenaya hassleriana
Thecc.04G033500 Theobroma cacao
Thhalv10023677m.g Eutrema salsugineum
TPR.G38298 Trifolium pratense
TPR.G39334 Trifolium pratense
TWI36G0847 Tripterygium wilfordii
unitig_8.g4492 Utricularia gibba
vmacro05946 Vaccinium macrocarpon
VMungo1383G3614 Vigna mungo
Zm00001eb317710 Zea mays

User provided reference genes

Program Settings