Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24730 Brassica napus
A05p04290 Brassica napus
Aa31LG1G25860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis
Actinidia02271 Actinidia chinensis
Actinidia26768 Actinidia chinensis
Actinidia38169 Actinidia chinensis
AL4G43150 Arabidopsis lyrata
AL4G43160 Arabidopsis lyrata
Aqoxy6G01137 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea
AT2G44195 Arabidopsis thaliana
AT2G44200 Arabidopsis thaliana
ATR0751G077 Amborella trichopoda
ATR0751G111 Amborella trichopoda
Atru.chr1.2204 Acer truncatum
AUR62016004 Chenopodium quinoa
AUR62016005 Chenopodium quinoa
AUR62021212 Chenopodium quinoa
BcaB01g03324 Brassica carinata
BcaB02g08878 Brassica carinata
BcaB02g08879 Brassica carinata
BcaB05g23360 Brassica carinata
BcaC01g05181 Brassica carinata
BcaC02g12330 Brassica carinata
BolC3t15295H Brassica oleracea
BraA03t11679Z Brassica rapa
BraA05t19414Z Brassica rapa
C03p29470 Brassica napus
C04p05070 Brassica napus
CAN.G2049.4 Capsicum annuum
CARHR139360 Cardamine hirsuta
Carub.0004s2677 Capsella rubella
Carub.0004s2678 Capsella rubella
Ca_00786_v3 Cicer arietinum L.
Ca_11373_v3 Cicer arietinum L.
CBR_g2953 Chara braunii
Cc09_g00040 Coffea canephora
CDE03G0050 Ceratophyllum demersum
CDE06G0152 Ceratophyllum demersum
CDE06G1717 Ceratophyllum demersum
Cfa024420 Carpinus fangiana
Ciclev10015350m.g Citrus clementina
CiPaw.09G114000 Carya illinoinensis
CiPaw.09G114200 Carya illinoinensis
CiPaw.10G085200 Carya illinoinensis
ClCG07G017100 Citrullus lanatus
COL.COLO4_12851 Corchorus olitorius
Cpa.g.sc53.124 Carica papaya
Cre01.g021400 Chlamydomonas reinhardtii
CsaV3_4G004310 Cucumis sativus L.
CSS0022453 Camellia sinensis var. sinensis
DCAR_022839 Daucus carota
DCAR_022842 Daucus carota
Dinv04372 Davidia involucrata
Duzib151G0457 Durio zibethinus
ECA234G3238 Erigeron canadensis
EL10Ac3g05669 Beta vulgaris
Eucgr.E04239 Eucalyptus grandis
FAN07G1972 Fragaria x ananassa
FAN12G3626 Fragaria x ananassa
FAN17G2578 Fragaria x ananassa
FAN22G2230 Fragaria x ananassa
FvH4_4g13451 Fragaria vesca
Glyma.09G018000 Glycine max
Glyma.15G123900 Glycine max
Gohir.A02G007200 Gossypium hirsutum
Gohir.D02G007001 Gossypium hirsutum
Gorai.005G008200 Gossypium raimondii
GSVIVG01018754001 Vitis vinifera
HanXRQChr17g0558521 Helianthus annuus
Haze_07067 Corylus avellana
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla
HPP92_007484 Vanilla planifolia
Hund04726 Selenicereus undatus
Lalb_Chr15g0088491 Lupinus albus
Lj6g0010372 Lotus japonicus
Lsat_1_v5_gn_4_65161 Lactuca sativa
Manes.03G095600 Manihot esculenta
Mapoly0017s0014 Marchantia polymorpha
Mapoly0051s0065 Marchantia polymorpha
Mapoly0104s0032 Marchantia polymorpha
MCO07G343 Micromonas commoda
MD04G1014200 Malus domestica
Medtr2g028200 Medicago truncatula
MELO3C017635.2 Cucumis melo
MELO3C028701.2 Cucumis melo
MELO3C030757.2 Cucumis melo
MELO3C030939.2 Cucumis melo
MELO3C033373.2 Cucumis melo
Migut.M01485 Erythranthe guttata
Nitab4.5_0002880g0010 Nicotiana tabacum
Nitab4.5_0005721g0030 Nicotiana tabacum
Nn1g08402 Nelumbo nucifera
Oeu016925.1 Olea europaea
Os08g0500200 Oryza sativa ssp. japonica
Peaxi162Scf00083g00091 Petunia axillaris
PGR042G0801 Punica granatum
PGSC0003DMG400003630 Solanum tuberosum
Phvul.006G134100 Phaseolus vulgaris
Potri.006G000200 Populus trichocarpa
Potri.016G000501 Populus trichocarpa
Pp3c3_9980 Physcomitrium patens
PRCOL_00001794 Prasinoderma coloniale
Prupe.1G161200 Prunus persica
Prupe.1G161500 Prunus persica
Prupe.1G162300 Prunus persica
Psat1g170800 Pisum sativum
PSO017G7149 Papaver somniferum
PSO170G6444 Papaver somniferum
QL05p065813 Quercus lobata
QL05p066147 Quercus lobata
RcHm_v2.0_Chr4g0414011 Rosa chinensis
Rhsim13G0137800 Rhododendron simsii
Sabra06G0000700 Salix brachista
SalBow8G1780 Salvia bowleyana
Sc13g0008540 Simmondsia chinensis
Sed0006700 Sechium edule
SEGI_06923 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03648 Striga asiatica
SMO114G0026 Selaginella moellendorffii
SMO117G0022 Selaginella moellendorffii
SMO117G0182 Selaginella moellendorffii
SMO117G0245 Selaginella moellendorffii
SMO117G0350 Selaginella moellendorffii
SMO143G0138 Selaginella moellendorffii
SMO246G0007 Selaginella moellendorffii
Solyc02g084340.3 Solanum lycopersicum
Sopen02g029040 Solanum pennellii
Sp4g26280 Schrenkiella parvula
TAR371G0561 Trochodendron aralioides
TAR626G1462 Trochodendron aralioides
THA.LOC104798630 Tarenaya hassleriana
THA.LOC104804861 Tarenaya hassleriana
THA.LOC104807080 Tarenaya hassleriana
Thecc.04G160200 Theobroma cacao
Thhalv10001457m.g Eutrema salsugineum
TPR.G10498 Trifolium pratense
TWI63G1825 Tripterygium wilfordii
unitig_748.g7855 Utricularia gibba
vmacro03583 Vaccinium macrocarpon
VMungo0540G0318 Vigna mungo
VMungo1383G0559 Vigna mungo
Zm00001eb034090 Zea mays
Zm00001eb072400 Zea mays
Zm00001eb087240 Zea mays
Zm00001eb097520 Zea mays

User provided reference genes

Program Settings