Gene: AT2G44200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G44200
  • Transcript Identifier AT2G44200.1
  • Gene Type Coding gene
  • Location Chr2 : 18276302-18278240 : positive

Gene Family Information

  • ID HOM05D005328
  • #Genes/#Species 142/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G44200.1
  • uniprot O64855

Descriptions

  • Description pre-mRNA splicing factor domain-containing protein
  • Computational description CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Pre-mRNA splicing factor (InterPro:IPR022209); BEST Arabidopsis thaliana protein match is: CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor (TAIR:AT2G44195.1); Has 59661 Blast hits to 33745 proteins in 1751 species: Archae - 130; Bacteria - 4372; Metazoa - 27826; Fungi - 6422; Plants - 3866; Viruses - 275; Other Eukaryotes - 16770 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
Gene OntologymRNA splicing, via spliceosome1
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005684
IBA
Gene OntologyU2-type spliceosomal complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022209 Pre-mRNA splicing factor
IPR019339 CBF1-interacting co-repressor CIR, N-terminal domain
Mapman id Description
35.1 not assigned.annotated