Gene: Solyc02g084340.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g084340.3
  • Transcript Identifier Solyc02g084340.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 45456538-45457893 : positive

Gene Family Information

  • ID HOM05D005328
  • #Genes/#Species 142/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g084340.3.1
  • uniprot A0A3Q7F829
  • gene_id Solyc02g084340

Descriptions

  • Description Pre-mRNA-splicing factor CWC25-like protein (AHRD V3.3 *** A0A1J3JVQ6_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005684
IBA
GOA DatabaseU2-type spliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019339 CBF1-interacting co-repressor CIR, N-terminal domain
IPR022209 Pre-mRNA splicing factor
Mapman id Description
35.1 not assigned.annotated