Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05370 Brassica napus
A06p44050 Brassica napus
Aa31sc131G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis
Actinidia14676 Actinidia chinensis
Actinidia14677 Actinidia chinensis
Actinidia15739 Actinidia chinensis
Ah.10g035010 Amaranthus hybridus
AL7G18800 Arabidopsis lyrata
Aqoxy7G03899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6B1VGR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EP17SZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea
AT4G32910 Arabidopsis thaliana
ATR0705G091 Amborella trichopoda
Atru.chr7.2086 Acer truncatum
AUR62009276 Chenopodium quinoa
AUR62039705 Chenopodium quinoa
BcaB03g16865 Brassica carinata
BcaB07g33046 Brassica carinata
BcaC08g43687 Brassica carinata
BcaC09g52090 Brassica carinata
BcaC09g52091 Brassica carinata
BolC1t00559H Brassica oleracea
BolC6t36187H Brassica oleracea
BolC9t59437H Brassica oleracea
BraA01t00511Z Brassica rapa
BraA06t27279Z Brassica rapa
C01p05790 Brassica napus
C09p66170 Brassica napus
CAN.G400.8 Capsicum annuum
CANSAT25G1337 Cannabis sativa
CARHR240910 Cardamine hirsuta
Carub.0007s0758 Capsella rubella
Ca_12754_v3 Cicer arietinum L.
CBR_g55394 Chara braunii
Cc08_g09590 Coffea canephora
CDE02G4285 Ceratophyllum demersum
CDE08G0324 Ceratophyllum demersum
CDE08G0658 Ceratophyllum demersum
CDE08G1138 Ceratophyllum demersum
Cfa013367 Carpinus fangiana
Ciclev10007610m.g Citrus clementina
CiPaw.07G204000 Carya illinoinensis
ClCG08G012210 Citrullus lanatus
COL.COLO4_20972 Corchorus olitorius
Cpa.g.c44012 Carica papaya
Cpa.g.c44533 Carica papaya
Cpa.g.sc2198.1 Carica papaya
Cpa.g.sc78.1 Carica papaya
Cpa.g.sc78.2 Carica papaya
Cre08.g383650 Chlamydomonas reinhardtii
CsaV3_2G030840 Cucumis sativus L.
CSS0016966 Camellia sinensis var. sinensis
CSS0048446 Camellia sinensis var. sinensis
DCAR_004468 Daucus carota
Dinv23369 Davidia involucrata
Dinv23370 Davidia involucrata
Dinv23371 Davidia involucrata
Dinv27905 Davidia involucrata
Duzib168G0872 Durio zibethinus
ECA233G0099 Erigeron canadensis
EL10Ac2g04016 Beta vulgaris
EL10Ac3g06375 Beta vulgaris
Eucgr.C00551 Eucalyptus grandis
Eucgr.C00596 Eucalyptus grandis
FAN20G0141 Fragaria x ananassa
FAN27G0819 Fragaria x ananassa
FvH4_2g35520 Fragaria vesca
FvH4_4g13810 Fragaria vesca
Glyma.14G146000 Glycine max
Glyma.17G193800 Glycine max
Gohir.A06G092700 Gossypium hirsutum
Gohir.D06G092300 Gossypium hirsutum
Gorai.010G106300 Gossypium raimondii
GSVIVG01035621001 Vitis vinifera
HanXRQChr13g0402061 Helianthus annuus
Haze_21890 Corylus avellana
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla
HPP92_005572 Vanilla planifolia
Hund19512 Selenicereus undatus
Lalb_Chr14g0362511 Lupinus albus
Lj1g0001172 Lotus japonicus
Lj5g0023577 Lotus japonicus
Lj8A581G22 Lonicera japonica
Lsat_1_v5_gn_4_165860 Lactuca sativa
Lsat_1_v5_gn_6_18560 Lactuca sativa
Lsat_1_v5_gn_6_23120 Lactuca sativa
Lsat_1_v5_gn_8_1401 Lactuca sativa
Manes.16G075300 Manihot esculenta
Mapoly0014s0066 Marchantia polymorpha
MBI01_g18389_MAGBIO Magnolia biondii
MCO04G172 Micromonas commoda
MD15G1093200 Malus domestica
Medtr1g006690 Medicago truncatula
MELO3C011139.2 Cucumis melo
Migut.E01528 Erythranthe guttata
MSTRG.1660 Avicennia marina
Nitab4.5_0001515g0010 Nicotiana tabacum
Nitab4.5_0003794g0010 Nicotiana tabacum
Nn8g39783 Nelumbo nucifera
Oeu031693.1 Olea europaea
Os01g0746200 Oryza sativa ssp. japonica
Peaxi162Scf00227g00812 Petunia axillaris
PGR031G0242 Punica granatum
Phvul.001G074000 Phaseolus vulgaris
Potri.018G044300 Populus trichocarpa
Pp3c16_3750 Physcomitrium patens
PRCOL_00003296 Prasinoderma coloniale
Prupe.1G448000 Prunus persica
Psat6g038280 Pisum sativum
Psat7g196840 Pisum sativum
PSO210G5473 Papaver somniferum
PSO210G6185 Papaver somniferum
QL08p060719 Quercus lobata
QL12p041325 Quercus lobata
RcHm_v2.0_Chr6g0306261 Rosa chinensis
Rhsim07G0146900 Rhododendron simsii
Sabra18G0044100 Salix brachista
Sabra18G0044200 Salix brachista
SalBow1G6937 Salvia bowleyana
Sc23g0005210 Simmondsia chinensis
Sed0007447 Sechium edule
SEGI_12145 Sequoiadendron giganteum
SEGI_14473 Sequoiadendron giganteum
SEGI_32974 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38073 Striga asiatica
SGA_v2.0_scaffold169G38654 Striga asiatica
SHI18685 Sapria himalayana
SMO146G0002 Selaginella moellendorffii
SMO173G0047 Selaginella moellendorffii
SMO173G0051 Selaginella moellendorffii
SMO173G0066 Selaginella moellendorffii
Solyc08g066580.4 Solanum lycopersicum
Sopen08g020420 Solanum pennellii
Sp7g30680 Schrenkiella parvula
TAR636G2525 Trochodendron aralioides
THA.LOC104803757 Tarenaya hassleriana
Thecc.09G045500 Theobroma cacao
Thhalv10024536m.g Eutrema salsugineum
TPR.G24498 Trifolium pratense
unitig_578.g16586 Utricularia gibba
unitig_578.g16587 Utricularia gibba
vmacro05371 Vaccinium macrocarpon
vmacro23276 Vaccinium macrocarpon
VMungo0647G0418 Vigna mungo
VMungo0647G1361 Vigna mungo
Zm00001eb152980 Zea mays

User provided reference genes

Program Settings