Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p25440 Brassica napus
A09p35950 Brassica napus
Aa31LG6G11750 Aethionema arabicum
Aa31LG9G9190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2898 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5060 Anthoceros agrestis
Actinidia13487 Actinidia chinensis
Actinidia20093 Actinidia chinensis
Ah.05g177320 Amaranthus hybridus
AL1G44540 Arabidopsis lyrata
AL6G48980 Arabidopsis lyrata
Aqoxy4G00009 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26BATJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PVE8MA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7I94B Arachis hypogaea
AT1G30510 Arabidopsis thaliana
AT4G05390 Arabidopsis thaliana
ATR0582G230 Amborella trichopoda
Atru.chr10.849 Acer truncatum
AUR62023326 Chenopodium quinoa
AUR62038006 Chenopodium quinoa
BcaB01g01901 Brassica carinata
BcaB07g32662 Brassica carinata
BcaB07g32686 Brassica carinata
BolC5t31681H Brassica oleracea
BolC9t56082H Brassica oleracea
BraA09t38119Z Brassica rapa
BraA09t39119Z Brassica rapa
C03p71450 Brassica napus
C05p29510 Brassica napus
C09p32370 Brassica napus
CAN.G79.37 Capsicum annuum
CANSAT11G0092 Cannabis sativa
CANSAT11G1196 Cannabis sativa
CANSAT11G2058 Cannabis sativa
CANSAT35G0187 Cannabis sativa
CARHR029920 Cardamine hirsuta
CARHR252190 Cardamine hirsuta
Carub.0001s2873 Capsella rubella
Carub.0006s3330 Capsella rubella
Ca_00841_v3 Cicer arietinum L.
CBR_g19271 Chara braunii
Cc09_g08000 Coffea canephora
CDE02G1171 Ceratophyllum demersum
CDE05G3408 Ceratophyllum demersum
Cfa000819 Carpinus fangiana
Ciclev10015627m.g Citrus clementina
CiPaw.10G085500 Carya illinoinensis
ClCG01G011190 Citrullus lanatus
COL.COLO4_26833 Corchorus olitorius
Cpa.g.sc166.32 Carica papaya
Cre11.g476750 Chlamydomonas reinhardtii
CsaV3_6G052330 Cucumis sativus L.
CSS0013697 Camellia sinensis var. sinensis
DCAR_003854 Daucus carota
Dinv10130 Davidia involucrata
Dinv10795 Davidia involucrata
Duzib192G0112 Durio zibethinus
Duzib235G0215 Durio zibethinus
ECA233G6104 Erigeron canadensis
ECA238G4061 Erigeron canadensis
EL10Ac1g00678 Beta vulgaris
Eucgr.D00177 Eucalyptus grandis
FAN11G3844 Fragaria x ananassa
FAN16G1019 Fragaria x ananassa
FAN21G1689 Fragaria x ananassa
FAN25G3384 Fragaria x ananassa
FvH4_3g10090 Fragaria vesca
Glyma.09G024100 Glycine max
Glyma.15G130100 Glycine max
Gohir.A05G110400 Gossypium hirsutum
Gohir.D05G110800 Gossypium hirsutum
Gorai.009G115100 Gossypium raimondii
GSVIVG01021650001 Vitis vinifera
HanXRQChr14g0433721 Helianthus annuus
Haze_05821 Corylus avellana
HPP92_017534 Vanilla planifolia
Hund17159 Selenicereus undatus
Hund26927 Selenicereus undatus
Lalb_Chr15g0088761 Lupinus albus
Lalb_Chr18g0057971 Lupinus albus
Lj1A1162T43 Lonicera japonica
Lj6g0023715 Lotus japonicus
Lj6g0026288 Lotus japonicus
Lsat_1_v5_gn_5_67180 Lactuca sativa
Manes.06G054800 Manihot esculenta
Manes.14G123200 Manihot esculenta
Mapoly0163s0011 Marchantia polymorpha
MBI02_g20987_MAGBIO Magnolia biondii
MCO09G277 Micromonas commoda
MD05G1273100 Malus domestica
MD10G1253200 Malus domestica
Medtr2g030200 Medicago truncatula
MELO3C007076.2 Cucumis melo
Migut.H01330 Erythranthe guttata
Migut.M01895 Erythranthe guttata
MSTRG.13270 Avicennia marina
Nitab4.5_0000574g0120 Nicotiana tabacum
Nitab4.5_0005178g0010 Nicotiana tabacum
Nn3g20190 Nelumbo nucifera
Oeu040081.1 Olea europaea
Oeu060306.1 Olea europaea
Os03g0784700 Oryza sativa ssp. japonica
Os07g0147900 Oryza sativa ssp. japonica
Peaxi162Scf00267g00021 Petunia axillaris
PGR042G3149 Punica granatum
PGR083G1387 Punica granatum
PGSC0003DMG400004095 Solanum tuberosum
PGSC0003DMG400011811 Solanum tuberosum
Phvul.006G128400 Phaseolus vulgaris
Potri.001G371900 Populus trichocarpa
Pp3c19_9770 Physcomitrium patens
Pp3c9_25700 Physcomitrium patens
Pp3c9_25950 Physcomitrium patens
PRCOL_00002039 Prasinoderma coloniale
PRCOL_00002643 Prasinoderma coloniale
Prupe.4G090300 Prunus persica
Psat1g167560 Pisum sativum
PSO210G4909 Papaver somniferum
PSO210G5242 Papaver somniferum
QL05p061864 Quercus lobata
RcHm_v2.0_Chr5g0016001 Rosa chinensis
Rhsim13G0120600 Rhododendron simsii
Sabra16G0244400 Salix brachista
SalBow4G0957 Salvia bowleyana
SalBow7G0308 Salvia bowleyana
Sc02g0003350 Simmondsia chinensis
Sed0012492 Sechium edule
Sed0025084 Sechium edule
SEGI_23403 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30669 Striga asiatica
SHI20699 Sapria himalayana
SMO143G0286 Selaginella moellendorffii
SMO169G0208 Selaginella moellendorffii
SMO236G0085 Selaginella moellendorffii
Solyc02g024050.3 Solanum lycopersicum
Sopen02g006780 Solanum pennellii
Sopen07g006870 Solanum pennellii
Sp1g26350 Schrenkiella parvula
Sp6g03700 Schrenkiella parvula
TAR627G1094 Trochodendron aralioides
THA.LOC104806255 Tarenaya hassleriana
THA.LOC104812425 Tarenaya hassleriana
Thecc.06G001800 Theobroma cacao
Thhalv10007919m.g Eutrema salsugineum
Thhalv10028734m.g Eutrema salsugineum
TPR.G26366 Trifolium pratense
TWI73G0030 Tripterygium wilfordii
unitig_0.g925 Utricularia gibba
vmacro03389 Vaccinium macrocarpon
vmacro03446 Vaccinium macrocarpon
VMungo0540G0579 Vigna mungo
Zm00001eb059850 Zea mays
Zm00001eb299960 Zea mays

User provided reference genes

Program Settings