Gene: AT1G30510
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G30510
- Transcript Identifier AT1G30510.2
- Gene Type Coding gene
- Location Chr1 : 10807150-10808984 : negative
Gene Family Information
- ID HOM05D000565
- #Genes/#Species 980/100
- Phylogenetic origin
- ID ORTHO05D005648
- #Genes/#Species 154/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G30510.2
- symbol RFNR2
- Alias ATRFNR2,root FNR 2
- uniprot Q9S9P8
Descriptions
- Description root FNR 2
- Computational description root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 6645 Blast hits to 6645 proteins in 1680 species: Archae - 12; Bacteria - 3566; Metazoa - 779; Fungi - 733; Plants - 567; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
- Computational description root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 6670 Blast hits to 6670 proteins in 1686 species: Archae - 12; Bacteria - 3590; Metazoa - 780; Fungi - 733; Plants - 567; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022900 | ISO | PLAZA Integrative Orthology | electron transport chain | Zm00001eb059850 |
| GO:0007166 | ISO | PLAZA Homology (enrichment) | cell surface receptor signaling pathway | HOM05D000565 |
| GO:0015979 | IEA | GOA Database | photosynthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0016653 | ISO | PLAZA Integrative Orthology | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | Zm00001eb059850 |
| GO:0070402 | ISO | PLAZA Integrative Orthology | NADPH binding | Zm00001eb059850 |
| GO:0003959 | ISO | PLAZA Integrative Orthology | NADPH dehydrogenase activity | Zm00001eb059850 |
| GO:0009055 | ISO | PLAZA Integrative Orthology | electron transfer activity | Zm00001eb059850 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Zm00001eb059850 |
| GO:0003954 | ISO | PLAZA Integrative Orthology | NADH dehydrogenase activity | Zm00001eb059850 |
| GO:0004324 | IEA | Gene Ontology | ferredoxin-NADP+ reductase activity | |
| GO:0005507 | IDA | GOA Database | copper ion binding | |
| GO:0005507 | HDA | Gene Ontology | copper ion binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015701 | Ferredoxin--NADP reductase |
| IPR017938 | Riboflavin synthase-like beta-barrel |
| IPR035442 | Ferredoxin--NADP reductase, plant and Cyanobacteria type |
| IPR039261 | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain |
| IPR001433 | Oxidoreductase FAD/NAD(P)-binding |
| IPR001709 | Flavoprotein pyridine nucleotide cytochrome reductase |
| Mapman id | Description |
|---|---|
| 50.1.17 | Enzyme classification.EC_1 oxidoreductases.EC_1.18 oxidoreductase acting on iron-sulfur protein as donor |