Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11890 Brassica napus
A08p31490 Brassica napus
A09p61150 Brassica napus
Aa31LG7G410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4144 Anthoceros agrestis
Actinidia00259 Actinidia chinensis
Ah.14g085470 Amaranthus hybridus
AL1G27970 Arabidopsis lyrata
Aqoxy5G01967 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4KW7H9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVEI5Y Arachis hypogaea
AT1G15820 Arabidopsis thaliana
ATR0680G016 Amborella trichopoda
Atru.chr6.1130 Acer truncatum
AUR62027370 Chenopodium quinoa
AUR62031289 Chenopodium quinoa
BcaC07g38795 Brassica carinata
BcaC07g41477 Brassica carinata
BolC5t30138H Brassica oleracea
BolC8t49357H Brassica oleracea
BolC8t52021H Brassica oleracea
BraA06t24359Z Brassica rapa
BraA08t35071Z Brassica rapa
BraA09t41489Z Brassica rapa
C05p14070 Brassica napus
C08p17310 Brassica napus
C08p44750 Brassica napus
CAN.G523.84 Capsicum annuum
CAN.G523.87 Capsicum annuum
CANSAT11G2240 Cannabis sativa
CANSAT21G1149 Cannabis sativa
CARHR016330 Cardamine hirsuta
Carub.0001s1561 Capsella rubella
Ca_00127_v3 Cicer arietinum L.
CBR_g85882 Chara braunii
Cc02_g21720 Coffea canephora
CDE10G0692 Ceratophyllum demersum
Cfa005626 Carpinus fangiana
Ciclev10029116m.g Citrus clementina
CiPaw.05G037900 Carya illinoinensis
CiPaw.06G152400 Carya illinoinensis
ClCG08G006910 Citrullus lanatus
COL.COLO4_33854 Corchorus olitorius
Cpa.g.sc42.88 Carica papaya
CsaV3_1G019610 Cucumis sativus L.
CsaV3_6G005340 Cucumis sativus L.
CSS0010636 Camellia sinensis var. sinensis
CSS0014245 Camellia sinensis var. sinensis
DCAR_021849 Daucus carota
DCAR_029208 Daucus carota
DCAR_029209 Daucus carota
Dinv24206 Davidia involucrata
Duzib248G1224 Durio zibethinus
ECA234G1650 Erigeron canadensis
ECA240G0768 Erigeron canadensis
EL10Ac8g19352 Beta vulgaris
Eucgr.G00777 Eucalyptus grandis
Eucgr.I02677 Eucalyptus grandis
FAN04G0220 Fragaria x ananassa
FAN08G1713 Fragaria x ananassa
FAN13G0572 Fragaria x ananassa
FAN18G3012 Fragaria x ananassa
FvH4_5g30940 Fragaria vesca
Glyma.05G119000 Glycine max
Glyma.08G074000 Glycine max
Glyma.08G180000 Glycine max
Glyma.15G052400 Glycine max
Gohir.A03G172800 Gossypium hirsutum
Gohir.A04G112750 Gossypium hirsutum
Gohir.A04G112800 Gossypium hirsutum
Gohir.D02G196000 Gossypium hirsutum
Gohir.D04G154000 Gossypium hirsutum
Gorai.005G219000 Gossypium raimondii
Gorai.012G141200 Gossypium raimondii
GSVIVG01029789001 Vitis vinifera
HanXRQChr03g0066961 Helianthus annuus
HanXRQChr10g0295961 Helianthus annuus
HanXRQChr16g0514061 Helianthus annuus
Haze_10642 Corylus avellana
Hma1.2p1_0217F.1_g091850 Hydrangea macrophylla
Hma1.2p1_0522F.1_g171530 Hydrangea macrophylla
Hma1.2p1_1341F.1_g276860 Hydrangea macrophylla
HPP92_002333 Vanilla planifolia
Hund06708 Selenicereus undatus
Lalb_Chr10g0097711 Lupinus albus
Lalb_Chr20g0123081 Lupinus albus
Lj5A241G62 Lonicera japonica
Lj6g0003994 Lotus japonicus
Lj9A320T29 Lonicera japonica
Lju1163A0T46 Lonicera japonica
Lsat_1_v5_gn_5_107040 Lactuca sativa
Lsat_1_v5_gn_9_117441 Lactuca sativa
Manes.14G167100 Manihot esculenta
Mapoly0052s0039 Marchantia polymorpha
MBI15_g00879_MAGBIO Magnolia biondii
MD08G1220900 Malus domestica
MD15G1411600 Malus domestica
Medtr2g008610 Medicago truncatula
MELO3C008358.2 Cucumis melo
Migut.B00625 Erythranthe guttata
Migut.N01061 Erythranthe guttata
MSTRG.5263 Avicennia marina
Nitab4.5_0002865g0050 Nicotiana tabacum
Nitab4.5_0002865g0060 Nicotiana tabacum
Nitab4.5_0003434g0030 Nicotiana tabacum
Nitab4.5_0003434g0050 Nicotiana tabacum
Nn1g05280 Nelumbo nucifera
Oeu037187.1 Olea europaea
Oeu038295.1 Olea europaea
Oeu055366.1 Olea europaea
Os04g0457000 Oryza sativa ssp. japonica
Peaxi162Scf00001g00212 Petunia axillaris
Peaxi162Scf00152g01119 Petunia axillaris
PGR042G1882 Punica granatum
PGSC0003DMG400012590 Solanum tuberosum
PGSC0003DMG400012591 Solanum tuberosum
Phvul.002G207500 Phaseolus vulgaris
Phvul.006G207300 Phaseolus vulgaris
Potri.001G210000 Populus trichocarpa
Potri.003G020400 Populus trichocarpa
Pp3c1_34210 Physcomitrium patens
Pp3c1_34240 Physcomitrium patens
Prupe.1G557800 Prunus persica
Psat1g216920 Pisum sativum
PSO133G0005 Papaver somniferum
PSO541G4447 Papaver somniferum
QL11p019860 Quercus lobata
RcHm_v2.0_Chr7g0226291 Rosa chinensis
Rhsim11G0135900 Rhododendron simsii
Sabra01G0162200 Salix brachista
SalBow5G4065 Salvia bowleyana
Sc18g0003750 Simmondsia chinensis
Sed0005610 Sechium edule
Sed0022231 Sechium edule
SEGI_05289 Sequoiadendron giganteum
SGA_v2.0_scaffold332G48955 Striga asiatica
SMO307G0015 Selaginella moellendorffii
Solyc01g105030.3 Solanum lycopersicum
Solyc01g105050.3 Solanum lycopersicum
Sopen01g047560 Solanum pennellii
Sopen01g047580 Solanum pennellii
Sp1g14130 Schrenkiella parvula
TAR381G1555 Trochodendron aralioides
TAR625G0473 Trochodendron aralioides
THA.LOC104808189 Tarenaya hassleriana
THA.LOC104812448 Tarenaya hassleriana
Thecc.02G141900 Theobroma cacao
Thhalv10008533m.g Eutrema salsugineum
TPR.G13606 Trifolium pratense
TWI14G1125 Tripterygium wilfordii
TWI59G0207 Tripterygium wilfordii
unitig_22.g6080 Utricularia gibba
unitig_8.g3473 Utricularia gibba
vmacro01817 Vaccinium macrocarpon
VMungo0251G0676 Vigna mungo
VMungo0540G0283 Vigna mungo
Zm00001eb066480 Zea mays
Zm00001eb433540 Zea mays

User provided reference genes

Program Settings