Gene: Sopen01g047580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g047580
  • Transcript Identifier Sopen01g047580.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 103967859-103968727 : positive

Gene Family Information

  • ID HOM05D000133
  • #Genes/#Species 2666/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g047580.1

Descriptions

  • Description Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II. | light harvesting complex photosystem II subunit 6 (LHCB6) | FUNCTIONS IN: chlorophyll binding | INVOLVED IN: photosynthesis, nonphotochemical quenching | LOCATED IN: in 7 components | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein | BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009765
IEA
InterProphotosynthesis, light harvesting
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT1G15820
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT1G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT1G15820
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G15820

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G15820
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G15820
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G15820
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT1G15820
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G15820
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G15820

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023329 Chlorophyll a/b binding domain superfamily
IPR001344 Chlorophyll A-B binding protein, plant and chromista
IPR022796 Chlorophyll A-B binding protein
Mapman id Description
1.1.1.1.4 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb6