Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30550 Brassica napus
A05p07060 Brassica napus
Aa31LG5G20290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.607 Anthoceros agrestis
Actinidia03006 Actinidia chinensis
Actinidia29199 Actinidia chinensis
Actinidia38225 Actinidia chinensis
Ah.16g107830 Amaranthus hybridus
AL4G36680 Arabidopsis lyrata
AL5G26090 Arabidopsis lyrata
Aqoxy5G01311 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.79HMAA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M4B7ES Arachis hypogaea
AT2G39340 Arabidopsis thaliana
ATR0681G328 Amborella trichopoda
Atru.chr12.592 Acer truncatum
AUR62025540 Chenopodium quinoa
AUR62042665 Chenopodium quinoa
BcaB02g09134 Brassica carinata
BcaB06g29078 Brassica carinata
BcaC02g07413 Brassica carinata
BcaC02g12050 Brassica carinata
BolC4t22443H Brassica oleracea
BolC4t28220H Brassica oleracea
BraA04t18452Z Brassica rapa
BraA05t19671Z Brassica rapa
C04p08450 Brassica napus
C04p67220 Brassica napus
CAN.G10752.1 Capsicum annuum
CAN.G1602.11 Capsicum annuum
CANSAT56G0145 Cannabis sativa
CARHR134130 Cardamine hirsuta
Carub.0004s2138 Capsella rubella
Ca_10211_v3 Cicer arietinum L.
CBR_g53551 Chara braunii
Cc02_g08650 Coffea canephora
CDE02G4519 Ceratophyllum demersum
CDE09G1073 Ceratophyllum demersum
Cfa001559 Carpinus fangiana
Ciclev10030610m.g Citrus clementina
CiPaw.01G279700 Carya illinoinensis
CiPaw.01G279800 Carya illinoinensis
CiPaw.02G178600 Carya illinoinensis
ClCG02G013670 Citrullus lanatus
COL.COLO4_05804 Corchorus olitorius
Cpa.g.sc1.303 Carica papaya
Cre06.g258100 Chlamydomonas reinhardtii
CsaV3_5G006520 Cucumis sativus L.
CSS0009141 Camellia sinensis var. sinensis
CSS0032527 Camellia sinensis var. sinensis
DCAR_005047 Daucus carota
DCAR_005053 Daucus carota
DCAR_027697 Daucus carota
Dinv31389 Davidia involucrata
Duzib106G1632 Durio zibethinus
Duzib128G1699 Durio zibethinus
ECA232G0450 Erigeron canadensis
EL10Ac2g03504 Beta vulgaris
Eucgr.G02777 Eucalyptus grandis
FAN06G1635 Fragaria x ananassa
FAN06G4940 Fragaria x ananassa
FAN10G3387 Fragaria x ananassa
FvH4_7g20770 Fragaria vesca
Glyma.10G292300 Glycine max
Glyma.20G242100 Glycine max
Gohir.A10G208900 Gossypium hirsutum
Gohir.D07G196232 Gossypium hirsutum
Gohir.D10G217200 Gossypium hirsutum
Gorai.011G242800 Gossypium raimondii
GSVIVG01032627001 Vitis vinifera
HanXRQChr09g0246591 Helianthus annuus
HanXRQChr15g0496771 Helianthus annuus
Haze_16972 Corylus avellana
Hma1.2p1_0207F.1_g087980 Hydrangea macrophylla
HPP92_015518 Vanilla planifolia
HPP92_015519 Vanilla planifolia
HPP92_015567 Vanilla planifolia
Hund22435 Selenicereus undatus
Hund28801 Selenicereus undatus
Hund28802 Selenicereus undatus
Lalb_Chr02g0143861 Lupinus albus
Lalb_Chr02g0143871 Lupinus albus
Lalb_Chr21g0307161 Lupinus albus
Lj5g0022773 Lotus japonicus
Lj8C92G16 Lonicera japonica
Manes.07G106300 Manihot esculenta
Manes.10G039400 Manihot esculenta
Mapoly0013s0152 Marchantia polymorpha
MBI05_g22074_MAGBIO Magnolia biondii
MBI05_g30758_MAGBIO Magnolia biondii
MBI05_g32639_MAGBIO Magnolia biondii
MCO13G063 Micromonas commoda
MD01G1117300 Malus domestica
MD07G1184700 Malus domestica
Medtr3g073080 Medicago truncatula
MELO3C023808.2 Cucumis melo
Migut.F01533 Erythranthe guttata
MSTRG.311 Avicennia marina
Nitab4.5_0000914g0100 Nicotiana tabacum
Nitab4.5_0010706g0030 Nicotiana tabacum
Nn2g10554 Nelumbo nucifera
Nn2g12827 Nelumbo nucifera
Oeu050639.2 Olea europaea
Oeu058323.4 Olea europaea
Os01g0836400 Oryza sativa ssp. japonica
Os05g0462600 Oryza sativa ssp. japonica
Peaxi162Scf00015g02711 Petunia axillaris
PGR044G1425 Punica granatum
PGR142G1216 Punica granatum
Phvul.007G008100 Phaseolus vulgaris
Potri.008G047700 Populus trichocarpa
Potri.010G213700 Populus trichocarpa
Pp3c1_11990 Physcomitrium patens
Pp3c2_24860 Physcomitrium patens
PRCOL_00002713 Prasinoderma coloniale
PRCOL_00005565 Prasinoderma coloniale
Prupe.2G224600 Prunus persica
Psat6g098640 Pisum sativum
Psat6g239040 Pisum sativum
PSO339G3701 Papaver somniferum
PSO339G6458 Papaver somniferum
PSO384G3825 Papaver somniferum
QL08p057534 Quercus lobata
QL10p060204 Quercus lobata
RcHm_v2.0_Chr1g0365011 Rosa chinensis
Sabra08G0033800 Salix brachista
Sabra10G0165400 Salix brachista
SalBow6G0521 Salvia bowleyana
Sc20g0002350 Simmondsia chinensis
Sed0010822 Sechium edule
Sed0023338 Sechium edule
SEGI_03051 Sequoiadendron giganteum
SEGI_11289 Sequoiadendron giganteum
SEGI_11420 Sequoiadendron giganteum
SGA_v2.0_scaffold291G47345 Striga asiatica
SHI28193 Sapria himalayana
SHI28196 Sapria himalayana
SMO141G0080 Selaginella moellendorffii
SMO143G0323 Selaginella moellendorffii
Solyc05g054910.3 Solanum lycopersicum
Sopen05g033370 Solanum pennellii
Sp4g21650 Schrenkiella parvula
SpUn0018_0020 Schrenkiella parvula
TAR381G0169 Trochodendron aralioides
TAR381G1264 Trochodendron aralioides
TAR633G1628 Trochodendron aralioides
TAR636G1569 Trochodendron aralioides
THA.LOC104809997 Tarenaya hassleriana
THA.LOC104824248 Tarenaya hassleriana
Thecc.10G063000 Theobroma cacao
Thhalv10016180m.g Eutrema salsugineum
TPR.G10417 Trifolium pratense
TWI15G0630 Tripterygium wilfordii
TWI38G2098 Tripterygium wilfordii
unitig_749.g14014 Utricularia gibba
VMungo0720G2546 Vigna mungo
Zm00001eb289820 Zea mays
Zm00001eb351500 Zea mays

User provided reference genes

Program Settings