Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G4630 Aethionema arabicum
Actinidia01632 Actinidia chinensis
Actinidia26192 Actinidia chinensis
Ah.09g231850 Amaranthus hybridus
Ah.14g085600 Amaranthus hybridus
AL1G21040 Arabidopsis lyrata
Aqoxy5G01864 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.87EYQC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3DQKX Arachis hypogaea
AT1G10310 Arabidopsis thaliana
ATR0189G001 Amborella trichopoda
ATR1089G061 Amborella trichopoda
Atru.chr6.331 Acer truncatum
AUR62022331 Chenopodium quinoa
AUR62034943 Chenopodium quinoa
BcaNung05165 Brassica carinata
BcaNung05227 Brassica carinata
BolC8t48998H Brassica oleracea
BraA08t35316Z Brassica rapa
CAN.G855.46 Capsicum annuum
CANSAT56G0278 Cannabis sativa
CARHR010440 Cardamine hirsuta
CARHR070920 Cardamine hirsuta
Carub.0001s0972 Capsella rubella
Ca_13531_v3 Cicer arietinum L.
Cc02_g23520 Coffea canephora
Cc02_g23530 Coffea canephora
CDE02G4514 Ceratophyllum demersum
Cfa004449 Carpinus fangiana
Cfa025565 Carpinus fangiana
Ciclev10002114m.g Citrus clementina
CiPaw.05G002000 Carya illinoinensis
ClCG11G000250 Citrullus lanatus
ClCG11G000320 Citrullus lanatus
ClCG11G000340 Citrullus lanatus
ClCG11G000350 Citrullus lanatus
ClCG11G000390 Citrullus lanatus
ClCG11G000420 Citrullus lanatus
ClCG11G000610 Citrullus lanatus
COL.COLO4_22860 Corchorus olitorius
Cpa.g.sc192.24 Carica papaya
CsaV3_1G039100 Cucumis sativus L.
CsaV3_1G039110 Cucumis sativus L.
CsaV3_1G039120 Cucumis sativus L.
CsaV3_5G013920 Cucumis sativus L.
CsaV3_5G013930 Cucumis sativus L.
CsaV3_5G013950 Cucumis sativus L.
CsaV3_5G013960 Cucumis sativus L.
CsaV3_5G014070 Cucumis sativus L.
CsaV3_5G015290 Cucumis sativus L.
CsaV3_5G015540 Cucumis sativus L.
CsaV3_5G015550 Cucumis sativus L.
CsaV3_5G015620 Cucumis sativus L.
CsaV3_UNG162230 Cucumis sativus L.
CSS0027306 Camellia sinensis var. sinensis
CSS0036471 Camellia sinensis var. sinensis
DCAR_031994 Daucus carota
DCAR_031995 Daucus carota
Dinv29675 Davidia involucrata
Dinv29676 Davidia involucrata
Duzib192G0673 Durio zibethinus
ECA248G0469 Erigeron canadensis
EL10Ac5g12512 Beta vulgaris
Eucgr.I02792 Eucalyptus grandis
Eucgr.I02793 Eucalyptus grandis
Eucgr.I02794 Eucalyptus grandis
FAN04G1787 Fragaria x ananassa
FAN18G2944 Fragaria x ananassa
FvH4_5g27970 Fragaria vesca
Glyma.03G006500 Glycine max
Gohir.A06G100404 Gossypium hirsutum
Gohir.A10G003300 Gossypium hirsutum
Gohir.D06G101100 Gossypium hirsutum
Gohir.D06G102600 Gossypium hirsutum
Gohir.D10G003300 Gossypium hirsutum
Gorai.010G117600 Gossypium raimondii
Gorai.010G129200 Gossypium raimondii
Gorai.011G003700 Gossypium raimondii
GSVIVG01023151001 Vitis vinifera
HanXRQChr12g0381691 Helianthus annuus
Haze_26597 Corylus avellana
Haze_26841 Corylus avellana
Hma1.2p1_0052F.1_g029960 Hydrangea macrophylla
HPP92_024399 Vanilla planifolia
Hund15393 Selenicereus undatus
Lalb_Chr07g0176801 Lupinus albus
Lj4g0025399 Lotus japonicus
Lj5A282G72 Lonicera japonica
Lsat_1_v5_gn_6_74660 Lactuca sativa
Lsat_1_v5_gn_9_121801 Lactuca sativa
Manes.07G028700 Manihot esculenta
MBI06_g32155_MAGBIO Magnolia biondii
MCO04G505 Micromonas commoda
MCO09G401 Micromonas commoda
MD08G1247500 Malus domestica
Medtr4g066050 Medicago truncatula
Medtr4g070490 Medicago truncatula
Medtr4g070500 Medicago truncatula
Medtr4g134660 Medicago truncatula
MELO3C015337.2 Cucumis melo
MELO3C022941.2 Cucumis melo
MELO3C025330.2 Cucumis melo
MELO3C026450.2 Cucumis melo
MELO3C026455.2 Cucumis melo
MELO3C026468.2 Cucumis melo
MELO3C027175.2 Cucumis melo
MELO3C034313.2 Cucumis melo
MELO3C034532.2 Cucumis melo
Migut.B00726 Erythranthe guttata
Migut.B00727 Erythranthe guttata
MSTRG.16471 Avicennia marina
Nitab4.5_0001057g0010 Nicotiana tabacum
Nitab4.5_0008306g0050 Nicotiana tabacum
Nn5g27347 Nelumbo nucifera
Oeu043613.1 Olea europaea
Os02g0557700 Oryza sativa ssp. japonica
PGSC0003DMG401024871 Solanum tuberosum
Phvul.003G075700 Phaseolus vulgaris
Potri.004G228533 Populus trichocarpa
PRCOL_00005689 Prasinoderma coloniale
Prupe.1G584900 Prunus persica
Psat4g001040 Pisum sativum
PSO210G6890 Papaver somniferum
PSO210G7568 Papaver somniferum
PSO447G0087 Papaver somniferum
RcHm_v2.0_Chr7g0220131 Rosa chinensis
RcHm_v2.0_Chr7g0220301 Rosa chinensis
Rhsim05G0115700 Rhododendron simsii
Rhsim05G0115900 Rhododendron simsii
Sabra01G0173500 Salix brachista
Sc03g0004970 Simmondsia chinensis
Sed0005829 Sechium edule
Sed0008301 Sechium edule
Sed0009620 Sechium edule
Sed0012472 Sechium edule
Sed0012640 Sechium edule
Sed0015061 Sechium edule
Sed0015991 Sechium edule
Sed0023226 Sechium edule
SEGI_19846 Sequoiadendron giganteum
SEGI_40058 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38271 Striga asiatica
SMO196G0063 Selaginella moellendorffii
Solyc01g103100.3 Solanum lycopersicum
Sopen01g045520 Solanum pennellii
Sp1g08910 Schrenkiella parvula
Sp6g10930 Schrenkiella parvula
TAR381G0334 Trochodendron aralioides
THA.LOC104810194 Tarenaya hassleriana
THA.LOC104821580 Tarenaya hassleriana
Thecc.06G016900 Theobroma cacao
Thhalv10008625m.g Eutrema salsugineum
TPR.G5962 Trifolium pratense
TWI14G0421 Tripterygium wilfordii
unitig_37.g12401 Utricularia gibba
vmacro19833 Vaccinium macrocarpon
VMungo1215G2691 Vigna mungo
Zm00001eb182190 Zea mays
Zm00001eb243890 Zea mays
Zm00001eb378920 Zea mays

User provided reference genes

Program Settings