Gene: PGSC0003DMG401024871
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG401024871
- Transcript Identifier PGSC0003DMT400063981
- Gene Type Coding gene
- Location ST4.03ch01 : 79864325-79868913 : positive
Gene Family Information
- ID HOM05D000904
- #Genes/#Species 662/100
- Phylogenetic origin
- ID ORTHO05D005281
- #Genes/#Species 160/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37438141
- id PGSC0003DMG401024871.v4.03
- uniprot M1CBI9
Descriptions
- Description Short-chain dehydrogenase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006760 | IBA | GOA Database | folic acid-containing compound metabolic process | |
| GO:0000398 | ISO | PLAZA Homology (enrichment) | mRNA splicing, via spliceosome | HOM05D000904 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0016616 | IBA | GOA Database | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D000904 |
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D000904 |
| GO:0046872 | ISO | PLAZA Homology (enrichment) | metal ion binding | HOM05D000904 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0089701 | ISO | PLAZA Homology (enrichment) | U2AF complex | HOM05D000904 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |