Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p24320 Brassica napus
A08p08590 Brassica napus
Aa31LG6G7920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis
Actinidia11712 Actinidia chinensis
Ah.03g136660 Amaranthus hybridus
AL1G47790 Arabidopsis lyrata
Aqoxy5G03217 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea
AT1G33410 Arabidopsis thaliana
ATR0810G183 Amborella trichopoda
Atru.chr12.2421 Acer truncatum
Atru.chr12.2422 Acer truncatum
Atru.chr6.17 Acer truncatum
AUR62032513 Chenopodium quinoa
AUR62042820 Chenopodium quinoa
BcaB03g13701 Brassica carinata
BcaB06g28204 Brassica carinata
BcaC02g08126 Brassica carinata
BcaC02g08127 Brassica carinata
BcaC02g08190 Brassica carinata
BcaC05g27806 Brassica carinata
BcaC07g37555 Brassica carinata
BolC4t27268H Brassica oleracea
BolC4t27334H Brassica oleracea
BolC4t27335H Brassica oleracea
BolC5t32536H Brassica oleracea
BolC8t47897H Brassica oleracea
BraA05t21326Z Brassica rapa
C04p57470 Brassica napus
C04p58080 Brassica napus
C05p38080 Brassica napus
CAN.G1379.29 Capsicum annuum
CAN.G1379.30 Capsicum annuum
CANSAT78G0369 Cannabis sativa
CARHR032850 Cardamine hirsuta
Carub.0001s3160 Capsella rubella
Ca_11506_v3 Cicer arietinum L.
CBR_g55213 Chara braunii
CDE01G0012 Ceratophyllum demersum
CDE01G0761 Ceratophyllum demersum
CDE01G0790 Ceratophyllum demersum
Cfa008545 Carpinus fangiana
Ciclev10000026m.g Citrus clementina
CiPaw.02G126600 Carya illinoinensis
ClCG06G008340 Citrullus lanatus
ClCG06G008350 Citrullus lanatus
ClCG06G008360 Citrullus lanatus
ClCG06G008370 Citrullus lanatus
COL.COLO4_31206 Corchorus olitorius
Cpa.g.sc21.215 Carica papaya
Cpa.g.sc21.217 Carica papaya
Cpa.g.sc21.218 Carica papaya
Cpa.g.sc21.222 Carica papaya
Cre07.g324000 Chlamydomonas reinhardtii
CsaV3_2G011850 Cucumis sativus L.
CSS0006928 Camellia sinensis var. sinensis
DCAR_003267 Daucus carota
Dinv24538 Davidia involucrata
Duzib235G1067 Durio zibethinus
ECA233G1393 Erigeron canadensis
ECA233G1839 Erigeron canadensis
ECA233G1970 Erigeron canadensis
ECA233G2822 Erigeron canadensis
ECA238G2349 Erigeron canadensis
EL10Ac6g13928 Beta vulgaris
Eucgr.G00034 Eucalyptus grandis
FAN05G0906 Fragaria x ananassa
FAN09G1182 Fragaria x ananassa
FvH4_6g26400 Fragaria vesca
Glyma.10G055100 Glycine max
Glyma.13G142200 Glycine max
Gohir.A11G274000 Gossypium hirsutum
Gohir.D11G284200 Gossypium hirsutum
Gorai.007G307100 Gossypium raimondii
GSVIVG01013013001 Vitis vinifera
GSVIVG01015912001 Vitis vinifera
HanXRQChr14g0452101 Helianthus annuus
Haze_11087 Corylus avellana
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla
Hma1.2p1_0052F.1_g030150 Hydrangea macrophylla
Hma1.2p1_0052F.1_g030160 Hydrangea macrophylla
HPP92_015361 Vanilla planifolia
Lalb_Chr21g0315021 Lupinus albus
Lj3g0009617 Lotus japonicus
Lj5C310G5 Lonicera japonica
Lj5g0014962 Lotus japonicus
Lsat_1_v5_gn_7_54700 Lactuca sativa
Lsat_1_v5_gn_8_801 Lactuca sativa
Manes.15G096100 Manihot esculenta
Mapoly0008s0081 Marchantia polymorpha
MCO16G497 Micromonas commoda
MD00G1034800 Malus domestica
MD05G1063300 Malus domestica
MD05G1161100 Malus domestica
MD05G1161300 Malus domestica
MD05G1162400 Malus domestica
MD05G1162900 Malus domestica
MD07G1280900 Malus domestica
MD08G1158600 Malus domestica
MD08G1158700 Malus domestica
MD10G1009800 Malus domestica
MD10G1160000 Malus domestica
Medtr1g063180 Medicago truncatula
MELO3C020407.2 Cucumis melo
Migut.N00999 Erythranthe guttata
MSTRG.5181 Avicennia marina
Nitab4.5_0000399g0040 Nicotiana tabacum
Nitab4.5_0004090g0140 Nicotiana tabacum
Nitab4.5_0004090g0150 Nicotiana tabacum
Nn3g20376 Nelumbo nucifera
Oeu010602.3 Olea europaea
Oeu010603.1 Olea europaea
Os02g0142500 Oryza sativa ssp. japonica
Os02g0142950 Oryza sativa ssp. japonica
Peaxi162Scf00194g00732 Petunia axillaris
PGR042G2652 Punica granatum
Phvul.003G139126 Phaseolus vulgaris
Phvul.007G218900 Phaseolus vulgaris
Potri.001G078600 Populus trichocarpa
Pp3c11_26590 Physcomitrium patens
Prupe.5G022000 Prunus persica
Psat4g135880 Pisum sativum
Psat6g073960 Pisum sativum
PSO063G6006 Papaver somniferum
PSO782G2901 Papaver somniferum
QL10p065261 Quercus lobata
RcHm_v2.0_Chr2g0126921 Rosa chinensis
RcHm_v2.0_Chr4g0402211 Rosa chinensis
Rhsim11G0112000 Rhododendron simsii
Sabra01G0055900 Salix brachista
SalBow1G7939 Salvia bowleyana
Sc07g0003370 Simmondsia chinensis
Sed0025950 Sechium edule
SEGI_00916 Sequoiadendron giganteum
SEGI_08839 Sequoiadendron giganteum
SEGI_12379 Sequoiadendron giganteum
SEGI_12765 Sequoiadendron giganteum
SEGI_15028 Sequoiadendron giganteum
SEGI_20053 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04471 Striga asiatica
SHI21155 Sapria himalayana
SHI21156 Sapria himalayana
SMO239G0052 Selaginella moellendorffii
Solyc01g102540.3 Solanum lycopersicum
Solyc01g102550.4 Solanum lycopersicum
Sopen01g044980 Solanum pennellii
Sp1g28860 Schrenkiella parvula
TAR339G0004 Trochodendron aralioides
TAR629G2955 Trochodendron aralioides
THA.LOC104806485 Tarenaya hassleriana
Thecc.06G064200 Theobroma cacao
Thhalv10006552m.g Eutrema salsugineum
TPR.G11274 Trifolium pratense
TWI14G0841 Tripterygium wilfordii
unitig_22.g5790 Utricularia gibba
unitig_22.g5791 Utricularia gibba
vmacro01638 Vaccinium macrocarpon
VMungo0720G0348 Vigna mungo
VMungo0720G1958 Vigna mungo
VMungo0720G2272 Vigna mungo
Zm00001eb232140 Zea mays

User provided reference genes

Program Settings