Gene: FAN05G0906

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN05G0906
  • Transcript Identifier FAN05G0906.1
  • Gene Type Coding gene
  • Location Fvb6-3 : 17687679-17700829 : positive

Gene Family Information

  • ID HOM05D001082
  • #Genes/#Species 568/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb6-3-augustus-gene-177.30.v1.0.a1
  • pacid 50501228

Descriptions

  • Description K14303 - nuclear pore complex protein Nup160 (NUP160, NUP120)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
ISO
PLAZA Integrative OrthologymRNA export from nucleus AT1G33410
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G33410
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT1G33410
GO:0016973
ISO
PLAZA Integrative Orthologypoly(A)+ mRNA export from nucleus AT1G33410
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G33410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G33410
GO:0031965
ISO
PLAZA Integrative Orthologynuclear membrane AT1G33410
GO:0005643
ISO
PLAZA Integrative Orthologynuclear pore AT1G33410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035192 Nuclear pore complex protein NUP160
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR021717 Nucleoporin Nup120/160
Mapman id Description
23.5.1.1.1.1 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP160)