Gene: Pp3c11_26590
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_26590
- Transcript Identifier Pp3c11_26590V3.2
- Gene Type Coding gene
- Location Chr11 : 17259600-17270258 : positive
Gene Family Information
- ID HOM05D001082
- #Genes/#Species 568/99
- Phylogenetic origin
- ID ORTHO05D005120
- #Genes/#Species 164/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c11_26590V3.2
- pacid 32957798
- alias Phpat.011G105700
- alias Phypa_172126
- alias Pp1s332_39V6
- uniprot A0A2K1JWG8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006913 | IEA | GOA Database | nucleocytoplasmic transport | |
| GO:0006406 | ISO | PLAZA Integrative Orthology | mRNA export from nucleus | AT1G33410 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G33410 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT1G33410 |
| GO:0016973 | ISO | PLAZA Integrative Orthology | poly(A)+ mRNA export from nucleus | AT1G33410 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G33410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IBA | GOA Database | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G33410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005643 | IBA | GOA Database | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT1G33410 |
| GO:0031965 | ISO | PLAZA Integrative Orthology | nuclear membrane | AT1G33410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.5.1.1.1.1 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP160) |