Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22860 Brassica napus
A07p27110 Brassica napus
Aa31LG4G1520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis
Actinidia07391 Actinidia chinensis
Ah.15g099340 Amaranthus hybridus
Ah.15g099350 Amaranthus hybridus
Ah.15g099360 Amaranthus hybridus
AL1G28460 Arabidopsis lyrata
AL2G40110 Arabidopsis lyrata
Aqoxy7G03543 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea
AT1G16340 Arabidopsis thaliana
AT1G79500 Arabidopsis thaliana
ATR0561G061 Amborella trichopoda
ATR0743G256 Amborella trichopoda
Atru.chr1.67 Acer truncatum
AUR62009294 Chenopodium quinoa
AUR62041708 Chenopodium quinoa
AUR62043393 Chenopodium quinoa
BcaB02g07218 Brassica carinata
BcaB05g25203 Brassica carinata
BcaC03g15900 Brassica carinata
BcaC08g45351 Brassica carinata
BcaC08g45353 Brassica carinata
BolC2t09663H Brassica oleracea
BolC6t38147H Brassica oleracea
BraA02t07287Z Brassica rapa
BraA07t30356Z Brassica rapa
C02p36680 Brassica napus
C06p29850 Brassica napus
CAN.G84.19 Capsicum annuum
CANSAT78G1193 Cannabis sativa
CARHR016810 Cardamine hirsuta
CARHR073160 Cardamine hirsuta
Carub.0001s1608 Capsella rubella
Carub.0002s2636 Capsella rubella
Ca_08047_v3 Cicer arietinum L.
Ca_08053_v3 Cicer arietinum L.
Cc11_g02350 Coffea canephora
CDE05G0560 Ceratophyllum demersum
Cfa020378 Carpinus fangiana
Ciclev10005458m.g Citrus clementina
CiPaw.13G024200 Carya illinoinensis
CiPaw.14G018200 Carya illinoinensis
ClCG03G001640 Citrullus lanatus
COL.COLO4_12345 Corchorus olitorius
Cpa.g.sc32.74 Carica papaya
CsaV3_1G034040 Cucumis sativus L.
CSS0009623 Camellia sinensis var. sinensis
CSS0035574 Camellia sinensis var. sinensis
DCAR_013716 Daucus carota
DCAR_016846 Daucus carota
Duzib187G1262 Durio zibethinus
Duzib187G1348 Durio zibethinus
Duzib268G0296 Durio zibethinus
ECA238G3087 Erigeron canadensis
EL10Ac2g04029 Beta vulgaris
Eucgr.K01360 Eucalyptus grandis
FAN11G3302 Fragaria x ananassa
FAN16G1654 Fragaria x ananassa
FAN21G0266 Fragaria x ananassa
FAN25G1815 Fragaria x ananassa
FvH4_3g14500 Fragaria vesca
Glyma.09G244900 Glycine max
Glyma.18G248300 Glycine max
Gohir.A08G080300 Gossypium hirsutum
Gohir.D08G090400 Gossypium hirsutum
Gorai.004G095400 Gossypium raimondii
GSVIVG01036737001 Vitis vinifera
HanXRQChr14g0449761 Helianthus annuus
Haze_02880 Corylus avellana
Haze_26612 Corylus avellana
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla
HPP92_024995 Vanilla planifolia
Lalb_Chr19g0126381 Lupinus albus
Lj1g0019682 Lotus japonicus
Lj4A247G30 Lonicera japonica
Lj7A89G45 Lonicera japonica
Lj7A89G46 Lonicera japonica
Lsat_1_v5_gn_2_10621 Lactuca sativa
Lsat_1_v5_gn_2_88340 Lactuca sativa
Lsat_1_v5_gn_3_92901 Lactuca sativa
Manes.03G080050 Manihot esculenta
Mapoly0024s0056 Marchantia polymorpha
MBI07_g44658_MAGBIO Magnolia biondii
MBI10_g05703_MAGBIO Magnolia biondii
MD05G1236400 Malus domestica
MD10G1213400 Malus domestica
Medtr7g081220 Medicago truncatula
MELO3C020651.2 Cucumis melo
Migut.H01658 Erythranthe guttata
MSTRG.13089 Avicennia marina
MSTRG.16093 Avicennia marina
Nitab4.5_0004015g0030 Nicotiana tabacum
Nitab4.5_0006659g0030 Nicotiana tabacum
Nn6g34391 Nelumbo nucifera
Oeu026000.2 Olea europaea
Os12g0210800 Oryza sativa ssp. japonica
Peaxi162Scf00616g00418 Petunia axillaris
PGR119G0090 Punica granatum
PGR119G1968 Punica granatum
PGSC0003DMG400025362 Solanum tuberosum
Phvul.008G049000 Phaseolus vulgaris
Potri.002G061900 Populus trichocarpa
Potri.005G199100 Populus trichocarpa
Pp3c22_7420 Physcomitrium patens
Prupe.4G129800 Prunus persica
Psat3g099560 Pisum sativum
PSO675G6017 Papaver somniferum
PSO732G0600 Papaver somniferum
PSO782G4107 Papaver somniferum
PSO832G2042 Papaver somniferum
QL04p091607 Quercus lobata
QL04p092150 Quercus lobata
QL04p092971 Quercus lobata
QL04p093439 Quercus lobata
RcHm_v2.0_Chr2g0110821 Rosa chinensis
RcHm_v2.0_Chr5g0023881 Rosa chinensis
RcHm_v2.0_Chr6g0274781 Rosa chinensis
Rhsim03G0145800 Rhododendron simsii
Rhsim06G0243500 Rhododendron simsii
Sabra05G0151600 Salix brachista
SalBow8G2534 Salvia bowleyana
SalBow8G3927 Salvia bowleyana
Sc15g0006060 Simmondsia chinensis
Sed0021681 Sechium edule
SEGI_07848 Sequoiadendron giganteum
SEGI_39104 Sequoiadendron giganteum
SGA_v2.0_scaffold239G44014 Striga asiatica
SGA_v2.0_scaffold49G18204 Striga asiatica
SHI21470 Sapria himalayana
SMO347G0325 Selaginella moellendorffii
Solyc11g072690.2 Solanum lycopersicum
Sopen11g030360 Solanum pennellii
Sp5g34553 Schrenkiella parvula
TAR636G1752 Trochodendron aralioides
TAR636G3127 Trochodendron aralioides
THA.LOC104812380 Tarenaya hassleriana
THA.LOC104813606 Tarenaya hassleriana
Thecc.06G006500 Theobroma cacao
Thhalv10008359m.g Eutrema salsugineum
Thhalv10018956m.g Eutrema salsugineum
TPR.G21772 Trifolium pratense
TPR.G29107 Trifolium pratense
TWI12G0564 Tripterygium wilfordii
unitig_744.g24505 Utricularia gibba
vmacro08704 Vaccinium macrocarpon
vmacro11688 Vaccinium macrocarpon
vmacro23274 Vaccinium macrocarpon
VMungo1383G2841 Vigna mungo
Zm00001eb138330 Zea mays

User provided reference genes

Program Settings