Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41350 Brassica napus
A02p41380 Brassica napus
A03p46750 Brassica napus
A09p07210 Brassica napus
Aa31LG11G2250 Aethionema arabicum
Actinidia04826 Actinidia chinensis
Actinidia16123 Actinidia chinensis
Ah.11g047830 Amaranthus hybridus
AL8G37710 Arabidopsis lyrata
AL8G37720 Arabidopsis lyrata
Aqoxy3G03637 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.30WRMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EY28RQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7KHNQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZD7DCY Arachis hypogaea
AT5G61050 Arabidopsis thaliana
AT5G61060 Arabidopsis thaliana
AT5G61070 Arabidopsis thaliana
ATR0064G039 Amborella trichopoda
Atru.chr9.430 Acer truncatum
AUR62008521 Chenopodium quinoa
AUR62021568 Chenopodium quinoa
AUR62021569 Chenopodium quinoa
BcaB07g34221 Brassica carinata
BcaC03g18073 Brassica carinata
BcaC04g23464 Brassica carinata
BcaC04g23465 Brassica carinata
BcaC06g33180 Brassica carinata
BolC2t12181H Brassica oleracea
BolC7t45003H Brassica oleracea
BolC9t53719H Brassica oleracea
BolC9t53720H Brassica oleracea
BraA02t09080Z Brassica rapa
BraA03t13797Z Brassica rapa
BraA09t36370Z Brassica rapa
BraA09t36371Z Brassica rapa
C02p61330 Brassica napus
C07p44790 Brassica napus
C09p08050 Brassica napus
C09p08060 Brassica napus
CAN.G1228.29 Capsicum annuum
CANSAT80G2151 Cannabis sativa
CARHR274760 Cardamine hirsuta
CARHR274770 Cardamine hirsuta
Carub.0008s2174 Capsella rubella
Carub.0008s2175 Capsella rubella
Carub.0008s2176 Capsella rubella
Ca_21779_v3 Cicer arietinum L.
CBR_g20016 Chara braunii
Cc00_g07600 Coffea canephora
CDE02G1247 Ceratophyllum demersum
CDE02G2613 Ceratophyllum demersum
Cfa019326 Carpinus fangiana
Ciclev10019240m.g Citrus clementina
CiPaw.11G052800 Carya illinoinensis
ClCG06G015680 Citrullus lanatus
COL.COLO4_06864 Corchorus olitorius
Cpa.g.c36738 Carica papaya
Cpa.g.sc140.1 Carica papaya
Cpa.g.sc140.13 Carica papaya
Cpa.g.sc67.15 Carica papaya
Cpa.g.sc94.49 Carica papaya
Cpa.g.sc94.50 Carica papaya
Cpa.g.sc99.1 Carica papaya
Cpa.g.sc99.2 Carica papaya
Cpa.g.sc99.3 Carica papaya
Cre11.g467785 Chlamydomonas reinhardtii
CsaV3_1G002870 Cucumis sativus L.
DCAR_011558 Daucus carota
Dinv17408 Davidia involucrata
Duzib068G1187 Durio zibethinus
Duzib205G1512 Durio zibethinus
ECA232G3750 Erigeron canadensis
ECA232G4674 Erigeron canadensis
ECA247G0276 Erigeron canadensis
EL10Ac5g11123 Beta vulgaris
Eucgr.B01265 Eucalyptus grandis
Eucgr.K02528 Eucalyptus grandis
Eucgr.K02530 Eucalyptus grandis
Eucgr.L02060 Eucalyptus grandis
Eucgr.L02064 Eucalyptus grandis
FAN08G0910 Fragaria x ananassa
FAN13G0112 Fragaria x ananassa
FAN18G3650 Fragaria x ananassa
FvH4_5g13910 Fragaria vesca
Glyma.05G021400 Glycine max
Glyma.17G078000 Glycine max
Gohir.A03G069900 Gossypium hirsutum
Gohir.D03G096500 Gossypium hirsutum
Gorai.003G101100 Gossypium raimondii
GSVIVG01007870001 Vitis vinifera
HanXRQChr10g0295221 Helianthus annuus
HanXRQChr16g0502421 Helianthus annuus
Haze_07717 Corylus avellana
Hma1.2p1_0060F.1_g033160 Hydrangea macrophylla
HPP92_006052 Vanilla planifolia
Hund02590 Selenicereus undatus
Lalb_Chr12g0197171 Lupinus albus
Lj4g0023799 Lotus japonicus
Lj5C103T5 Lonicera japonica
Lsat_1_v5_gn_4_111000 Lactuca sativa
Lsat_1_v5_gn_5_75420 Lactuca sativa
Manes.06G085100 Manihot esculenta
Mapoly0023s0094 Marchantia polymorpha
Mapoly0049s0028 Marchantia polymorpha
MCO07G211 Micromonas commoda
MD06G1202300 Malus domestica
MD14G1211400 Malus domestica
Medtr4g109500 Medicago truncatula
MELO3C017221.2 Cucumis melo
Migut.D01491 Erythranthe guttata
Migut.D01738 Erythranthe guttata
Migut.D01741 Erythranthe guttata
Migut.D01742 Erythranthe guttata
Migut.D01743 Erythranthe guttata
Migut.I00311 Erythranthe guttata
MSTRG.22987 Avicennia marina
Nitab4.5_0001485g0180 Nicotiana tabacum
Nitab4.5_0003660g0060 Nicotiana tabacum
Nitab4.5_0012564g0010 Nicotiana tabacum
Nn3g17442 Nelumbo nucifera
Nn3g20653 Nelumbo nucifera
Nn5g28522 Nelumbo nucifera
Oeu031813.2 Olea europaea
Os07g0602200 Oryza sativa ssp. japonica
Peaxi162Scf00201g00236 Petunia axillaris
PGR044G1429 Punica granatum
PGSC0003DMG400024639 Solanum tuberosum
Phvul.003G185200 Phaseolus vulgaris
Potri.004G092900 Populus trichocarpa
Pp3c14_21020 Physcomitrium patens
Prupe.5G204500 Prunus persica
Psat0s3618g0040 Pisum sativum
PSO017G1932 Papaver somniferum
PSO017G2770 Papaver somniferum
PSO017G5497 Papaver somniferum
PSO017G7272 Papaver somniferum
PSO478G4502 Papaver somniferum
QL10p019416 Quercus lobata
RcHm_v2.0_Chr7g0183031 Rosa chinensis
Rhsim08G0146300 Rhododendron simsii
Sabra04G0062400 Salix brachista
SalBow1G6805 Salvia bowleyana
SalBow1G7771 Salvia bowleyana
SalBow2G3026 Salvia bowleyana
SalBow5G0478 Salvia bowleyana
SalBow5G2451 Salvia bowleyana
SalBow5G2522 Salvia bowleyana
Sc04g0004320 Simmondsia chinensis
Sed0000594 Sechium edule
Sed0006061 Sechium edule
SEGI_12166 Sequoiadendron giganteum
SEGI_24328 Sequoiadendron giganteum
SGA_v2.0_scaffold313G48312 Striga asiatica
SMO203G0267 Selaginella moellendorffii
Solyc03g115150.4 Solanum lycopersicum
Sopen03g034210 Solanum pennellii
Sp2g24350 Schrenkiella parvula
TAR629G1683 Trochodendron aralioides
TAR629G3345 Trochodendron aralioides
THA.LOC104801191 Tarenaya hassleriana
Thecc.03G101100 Theobroma cacao
Thhalv10003787m.g Eutrema salsugineum
TPR.G10982 Trifolium pratense
TPR.G2048 Trifolium pratense
TWI81G0708 Tripterygium wilfordii
unitig_26.g9658 Utricularia gibba
vmacro17607 Vaccinium macrocarpon
VMungo1215G0855 Vigna mungo
Zm00001eb108570 Zea mays

User provided reference genes

Program Settings