Gene: Carub.0008s2176
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s2176
- Transcript Identifier Carub.0008s2176.1
- Gene Type Coding gene
- Location scaffold_8 : 10849542-10853148 : negative
Gene Family Information
- ID HOM05D001053
- #Genes/#Species 576/99
- Phylogenetic origin
- ID ORTHO05D004820
- #Genes/#Species 170/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Carub.0008s2176.v1.1
- pacid 39252802
- synonym Carubv10028344m.g
Descriptions
- Description K11407 - histone deacetylase 6 (HDAC6)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT5G61070 |
| GO:0045604 | ISO | PLAZA Integrative Orthology | regulation of epidermal cell differentiation | AT5G61070 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004407 | ISO | PLAZA Integrative Orthology | histone deacetylase activity | AT5G61070 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G61070 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G61070 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase |