Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18170 Brassica napus
Aa31LG5G10400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis
Ah.14g087580 Amaranthus hybridus
AL1048U10010 Arabidopsis lyrata
AL1G51930 Arabidopsis lyrata
AL1G52050 Arabidopsis lyrata
AL2G26020 Arabidopsis lyrata
AL7G25820 Arabidopsis lyrata
Aqoxy1G03250 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PHJ7DT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea
AT1G72270 Arabidopsis thaliana
AT4G27010 Arabidopsis thaliana
ATR0752G176 Amborella trichopoda
ATR0752G210 Amborella trichopoda
Atru.chr2.3354 Acer truncatum
Atru.chr2.3366 Acer truncatum
AUR62015755 Chenopodium quinoa
AUR62020460 Chenopodium quinoa
BcaNung03573 Brassica carinata
BcaNung03576 Brassica carinata
BolC1t02247H Brassica oleracea
BraA01t01772Z Brassica rapa
C01p23130 Brassica napus
CAN.G93.17 Capsicum annuum
CANSAT21G0957 Cannabis sativa
CARHR229800 Cardamine hirsuta
CARHR229810 Cardamine hirsuta
CARHR229820 Cardamine hirsuta
CARHR233850 Cardamine hirsuta
CARHR234630 Cardamine hirsuta
CARHR234640 Cardamine hirsuta
Carub.0004s0902 Capsella rubella
Carub.0007s1383 Capsella rubella
Ca_01714_v3 Cicer arietinum L.
Ca_01853_v3 Cicer arietinum L.
CBR_g48672 Chara braunii
Cc02_g11170 Coffea canephora
CDE12G0710 Ceratophyllum demersum
Ciclev10007236m.g Citrus clementina
Ciclev10007711m.g Citrus clementina
Ciclev10007833m.g Citrus clementina
CiPaw.11G188300 Carya illinoinensis
ClCG09G008390 Citrullus lanatus
COL.COLO4_07980 Corchorus olitorius
COL.COLO4_07981 Corchorus olitorius
Cpa.g.sc25.33 Carica papaya
Cre02.g074300 Chlamydomonas reinhardtii
CsaV3_7G026680 Cucumis sativus L.
CSS0014906 Camellia sinensis var. sinensis
CSS0021387 Camellia sinensis var. sinensis
CSS0042398 Camellia sinensis var. sinensis
DCAR_015293 Daucus carota
Dinv12032 Davidia involucrata
Dinv31299 Davidia involucrata
Duzib213G0609 Durio zibethinus
ECA238G2706 Erigeron canadensis
EL10Ac4g07826 Beta vulgaris
Eucgr.F03461 Eucalyptus grandis
FAN11G2639 Fragaria x ananassa
FAN16G2970 Fragaria x ananassa
FAN21G1021 Fragaria x ananassa
FAN25G0312 Fragaria x ananassa
FvH4_3g22520 Fragaria vesca
Glyma.02G172300 Glycine max
Glyma.08G316100 Glycine max
Glyma.18G096800 Glycine max
Gohir.A05G328600 Gossypium hirsutum
Gohir.A05G328608 Gossypium hirsutum
Gohir.A05G328616 Gossypium hirsutum
Gohir.D05G329600 Gossypium hirsutum
Gorai.009G353000 Gossypium raimondii
GSVIVG01037632001 Vitis vinifera
HanXRQChr14g0456751 Helianthus annuus
Haze_08116 Corylus avellana
Haze_09664 Corylus avellana
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla
HPP92_009518 Vanilla planifolia
HPP92_009565 Vanilla planifolia
HPP92_009566 Vanilla planifolia
Hund02060 Selenicereus undatus
Lalb_Chr15g0081151 Lupinus albus
Lj4A310G25 Lonicera japonica
Lj4A310T24 Lonicera japonica
Lj4A311T24 Lonicera japonica
Lj4C310T3 Lonicera japonica
Lj4C311T3 Lonicera japonica
Lj6g0024588 Lotus japonicus
Lsat_1_v5_gn_1_14301 Lactuca sativa
Lsat_1_v5_gn_2_112761 Lactuca sativa
Manes.15G088800 Manihot esculenta
Mapoly0015s0081 Marchantia polymorpha
MBI16_g24182_MAGBIO Magnolia biondii
MCO01G437 Micromonas commoda
MD03G1202300 Malus domestica
Medtr3g051730 Medicago truncatula
MELO3C021122.2 Cucumis melo
MELO3C029177.2 Cucumis melo
Migut.D01652 Erythranthe guttata
Migut.F01968 Erythranthe guttata
MSTRG.9162 Avicennia marina
Nitab4.5_0000071g0230 Nicotiana tabacum
Nitab4.5_0014432g0010 Nicotiana tabacum
Nitab4.5_0014432g0020 Nicotiana tabacum
Nn004s41399 Nelumbo nucifera
Nn1g07120 Nelumbo nucifera
Oeu042740.2 Olea europaea
Os04g0625300 Oryza sativa ssp. japonica
Os04g0625350 Oryza sativa ssp. japonica
Peaxi162Scf01227g00036 Petunia axillaris
PGR031G0089 Punica granatum
Phvul.006G043300 Phaseolus vulgaris
Potri.001G423600 Populus trichocarpa
Pp3c2_30140 Physcomitrium patens
Prupe.4G211600 Prunus persica
Psat1g105760 Pisum sativum
Psat3g160280 Pisum sativum
Psat5g198920 Pisum sativum
Psat7g030440 Pisum sativum
Psat7g035480 Pisum sativum
Psat7g202680 Pisum sativum
PSO478G0467 Papaver somniferum
PSO541G2928 Papaver somniferum
PSO675G8409 Papaver somniferum
QL08p010601 Quercus lobata
QL08p010640 Quercus lobata
QL08p010650 Quercus lobata
QL08p010686 Quercus lobata
QL08p010874 Quercus lobata
QL08p010925 Quercus lobata
QL08p010959 Quercus lobata
QL08p011039 Quercus lobata
QL10p036338 Quercus lobata
QL10p036392 Quercus lobata
QL11p042372 Quercus lobata
RcHm_v2.0_Chr5g0039171 Rosa chinensis
RcHm_v2.0_Chr5g0039221 Rosa chinensis
RcHm_v2.0_Chr5g0039261 Rosa chinensis
RcHm_v2.0_Chr5g0039541 Rosa chinensis
Rhsim03G0118500 Rhododendron simsii
SalBow4G0132 Salvia bowleyana
SalBow4G0850 Salvia bowleyana
Sc07g0002730 Simmondsia chinensis
Sed0026666 Sechium edule
SEGI_04455 Sequoiadendron giganteum
SEGI_05754 Sequoiadendron giganteum
SEGI_11631 Sequoiadendron giganteum
SEGI_13878 Sequoiadendron giganteum
SEGI_19037 Sequoiadendron giganteum
SEGI_24019 Sequoiadendron giganteum
SEGI_30448 Sequoiadendron giganteum
SEGI_37008 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06370 Striga asiatica
SHI26626 Sapria himalayana
SHI26627 Sapria himalayana
SHI26628 Sapria himalayana
SMO146G0332 Selaginella moellendorffii
Solyc02g065500.4 Solanum lycopersicum
Sopen02g015700 Solanum pennellii
Sp7g24970 Schrenkiella parvula
TAR626G1614 Trochodendron aralioides
THA.LOC104817664 Tarenaya hassleriana
Thecc.07G167900 Theobroma cacao
Thecc.07G169600 Theobroma cacao
Thhalv10009735m.g Eutrema salsugineum
Thhalv10024185m.g Eutrema salsugineum
TPR.G34799 Trifolium pratense
TWI38G0366 Tripterygium wilfordii
vmacro22462 Vaccinium macrocarpon
VMungo0540G0476 Vigna mungo
VMungo0540G1458 Vigna mungo
Zm00001eb070180 Zea mays
Zm00001eb254380 Zea mays
Zm00001eb276420 Zea mays

User provided reference genes

Program Settings