Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p18100 Brassica napus
A09p56810 Brassica napus
Aa31LG7G13140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.772 Anthoceros agrestis
Actinidia04606 Actinidia chinensis
Actinidia04607 Actinidia chinensis
Actinidia12097 Actinidia chinensis
Actinidia36535 Actinidia chinensis
Ah.02g126300 Amaranthus hybridus
AL4G13740 Arabidopsis lyrata
Aqoxy5G01732 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea
AT2G23740 Arabidopsis thaliana
ATR0733G136 Amborella trichopoda
Atru.chr3.486 Acer truncatum
Atru.chr3.487 Acer truncatum
Atru.chr3.488 Acer truncatum
AUR62003214 Chenopodium quinoa
AUR62008036 Chenopodium quinoa
BcaB06g27931 Brassica carinata
BcaC02g08548 Brassica carinata
BolC4t26866H Brassica oleracea
BraA04t17428Z Brassica rapa
BraA09t41070Z Brassica rapa
C04p53050 Brassica napus
CAN.G836.12 Capsicum annuum
CANSAT01G2579 Cannabis sativa
CARHR114610 Cardamine hirsuta
Carub.0004s0292 Capsella rubella
Ca_22239_v3 Cicer arietinum L.
Ca_24816_v3 Cicer arietinum L.
CBR_g22240 Chara braunii
CDE09G0016 Ceratophyllum demersum
CDE09G0193 Ceratophyllum demersum
CDE09G0277 Ceratophyllum demersum
Ciclev10024695m.g Citrus clementina
CiPaw.01G030400 Carya illinoinensis
CiPaw.02G013900 Carya illinoinensis
ClCG01G016320 Citrullus lanatus
COL.COLO4_22162 Corchorus olitorius
COL.COLO4_22163 Corchorus olitorius
Cpa.g.sc15.107 Carica papaya
Cpa.g.sc6035.1 Carica papaya
CsaV3_6G042640 Cucumis sativus L.
CSS0018552 Camellia sinensis var. sinensis
CSS0040273 Camellia sinensis var. sinensis
DCAR_010955 Daucus carota
Dinv39934 Davidia involucrata
Duzib187G0333 Durio zibethinus
Duzib264G0212 Durio zibethinus
ECA232G0911 Erigeron canadensis
EL10Ac6g14864 Beta vulgaris
Eucgr.H01928 Eucalyptus grandis
Eucgr.H01929 Eucalyptus grandis
FAN19G2782 Fragaria x ananassa
FAN23G1146 Fragaria x ananassa
FAN26G3224 Fragaria x ananassa
FAN28G1810 Fragaria x ananassa
FvH4_1g14350 Fragaria vesca
Glyma.01G180100 Glycine max
Glyma.02G060500 Glycine max
Glyma.11G062100 Glycine max
Glyma.16G143100 Glycine max
Gohir.A02G162100 Gossypium hirsutum
Gohir.A02G162200 Gossypium hirsutum
Gohir.D03G018200 Gossypium hirsutum
Gohir.D03G018300 Gossypium hirsutum
Gohir.D03G018350 Gossypium hirsutum
Gohir.D11G138200 Gossypium hirsutum
Gohir.D11G249100 Gossypium hirsutum
Gorai.003G018400 Gossypium raimondii
Gorai.003G018700 Gossypium raimondii
Gorai.003G018800 Gossypium raimondii
Gorai.007G157100 Gossypium raimondii
Gorai.007G266700 Gossypium raimondii
GSVIVG01019046001 Vitis vinifera
HanXRQChr09g0265141 Helianthus annuus
Haze_15153 Corylus avellana
HPP92_007809 Vanilla planifolia
HPP92_007810 Vanilla planifolia
Hund14126 Selenicereus undatus
Lalb_Chr05g0213051 Lupinus albus
Lalb_Chr05g0227191 Lupinus albus
Lj2g0022074 Lotus japonicus
Lj3g0021520 Lotus japonicus
Lj4g0005897 Lotus japonicus
Lj4g0020969 Lotus japonicus
Lj4g0026497 Lotus japonicus
Lj7C14G2 Lonicera japonica
Lsat_1_v5_gn_4_176280 Lactuca sativa
Manes.13G134300 Manihot esculenta
Mapoly0003s0206 Marchantia polymorpha
MBI03_g37764_MAGBIO Magnolia biondii
MBI16_g10970_MAGBIO Magnolia biondii
MD02G1157000 Malus domestica
MD11G1104100 Malus domestica
MD15G1271600 Malus domestica
Medtr4g132610 Medicago truncatula
Medtr4g132670 Medicago truncatula
Medtr5g018850 Medicago truncatula
Medtr8g078490 Medicago truncatula
Medtr8g078505 Medicago truncatula
Medtr8g078700 Medicago truncatula
Medtr8g442480 Medicago truncatula
Medtr8g442490 Medicago truncatula
MELO3C007503.2 Cucumis melo
Migut.H00513 Erythranthe guttata
MSTRG.23812 Avicennia marina
Nitab4.5_0000483g0060 Nicotiana tabacum
Nitab4.5_0004932g0040 Nicotiana tabacum
Nn1g04082 Nelumbo nucifera
Nn1g05132 Nelumbo nucifera
Nn5g29464 Nelumbo nucifera
Oeu027318.1 Olea europaea
Oeu027319.1 Olea europaea
Os02g0708500 Oryza sativa ssp. japonica
Os02g0708600 Oryza sativa ssp. japonica
Peaxi162Scf00535g00417 Petunia axillaris
PGR102G2765 Punica granatum
Phvul.002G024600 Phaseolus vulgaris
Potri.005G129800 Populus trichocarpa
Potri.007G033000 Populus trichocarpa
Pp3c19_9880 Physcomitrium patens
Pp3c19_9910 Physcomitrium patens
Pp3c19_9920 Physcomitrium patens
Pp3c22_17280 Physcomitrium patens
Pp3c8_250 Physcomitrium patens
Prupe.7G146600 Prunus persica
Psat0ss24986g0080 Pisum sativum
Psat0ss24986g0120 Pisum sativum
Psat2g163120 Pisum sativum
Psat4g090200 Pisum sativum
Psat5g102560 Pisum sativum
Psat6g097480 Pisum sativum
PSO170G1741 Papaver somniferum
PSO700G0125 Papaver somniferum
QL06p044462 Quercus lobata
RcHm_v2.0_Chr2g0103021 Rosa chinensis
Rhsim10G0122500 Rhododendron simsii
Sabra05G0105100 Salix brachista
Sabra07G0028900 Salix brachista
SalBow1G1781 Salvia bowleyana
Sc03g0001070 Simmondsia chinensis
Sed0027730 Sechium edule
SEGI_04650 Sequoiadendron giganteum
SEGI_11374 Sequoiadendron giganteum
SEGI_19185 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07183 Striga asiatica
SGA_v2.0_scaffold280G46873 Striga asiatica
SHI08703 Sapria himalayana
SHI08704 Sapria himalayana
SHI08705 Sapria himalayana
SMO304G0132 Selaginella moellendorffii
SMO304G0138 Selaginella moellendorffii
Solyc02g089970.3 Solanum lycopersicum
Sopen02g034660 Solanum pennellii
Sp4g02670 Schrenkiella parvula
TAR381G1430 Trochodendron aralioides
TAR625G1531 Trochodendron aralioides
THA.LOC104807561 Tarenaya hassleriana
Thecc.01G044200 Theobroma cacao
Thhalv10000012m.g Eutrema salsugineum
TPR.G12248 Trifolium pratense
TPR.G29867 Trifolium pratense
TPR.G31552 Trifolium pratense
TPR.G31559 Trifolium pratense
TPR.G4454 Trifolium pratense
TPR.G5192 Trifolium pratense
TWI73G0223 Tripterygium wilfordii
unitig_736.g22253 Utricularia gibba
unitig_899.g15136 Utricularia gibba
vmacro05281 Vaccinium macrocarpon
VMungo1215G1516 Vigna mungo
Zm00001eb159360 Zea mays
Zm00001eb188560 Zea mays
Zm00001eb252300 Zea mays

User provided reference genes

Program Settings