Gene: Sopen02g034660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g034660
  • Transcript Identifier Sopen02g034660.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 55920042-55929031 : negative

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g034660.1

Descriptions

  • Description nucleic acid binding, sequence-specific DNA binding transcription factors, zinc ion binding | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: chromatin modification | LOCATED IN: intracellular, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , SET domain , Pre-SET domain , Post-SET domain , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
InterProhistone lysine methylation
GO:1900109
ISO
PLAZA Integrative Orthologyregulation of histone H3-K9 dimethylation AT2G23740
GO:0006338
ISO
PLAZA Integrative Orthologychromatin remodeling AT2G23740
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT2G23740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0005515
IEA
InterProprotein binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G23740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007728 Pre-SET domain
IPR021721 Zinc finger, CCCH-type, TRM13
IPR003616 Post-SET domain
IPR001214 SET domain
IPR013087 Zinc finger C2H2-type
IPR040689 SUVR5, C2H2-type Zinc finger, 3 repeats
Mapman id Description
12.3.3.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar)