Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p12990 Brassica napus
A08p13090 Brassica napus
A08p13100 Brassica napus
A10p19550 Brassica napus
Aa31LG1G14210 Aethionema arabicum
Aa31LG4G13300 Aethionema arabicum
Actinidia00658 Actinidia chinensis
Actinidia07812 Actinidia chinensis
Actinidia29727 Actinidia chinensis
Actinidia33901 Actinidia chinensis
Actinidia33902 Actinidia chinensis
Actinidia33903 Actinidia chinensis
Ah.16g103940 Amaranthus hybridus
AL5G20900 Arabidopsis lyrata
AL6G31990 Arabidopsis lyrata
Aqoxy7G00421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.89IITC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M7CALB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF2MUZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9Z9L7 Arachis hypogaea
AT3G42670 Arabidopsis thaliana
AT5G20420 Arabidopsis thaliana
ATR0594G054 Amborella trichopoda
ATR0594G114 Amborella trichopoda
Atru.chr12.108 Acer truncatum
AUR62012311 Chenopodium quinoa
AUR62022951 Chenopodium quinoa
BcaB08g36500 Brassica carinata
BcaC04g19431 Brassica carinata
BcaC07g38060 Brassica carinata
BolC8t48449H Brassica oleracea
BolC8t48455H Brassica oleracea
BolC8t48460H Brassica oleracea
BolC9t58445H Brassica oleracea
BraA08t33283Z Brassica rapa
BraA10t44031Z Brassica rapa
C09p55760 Brassica napus
CAN.G830.1 Capsicum annuum
CANSAT56G0874 Cannabis sativa
CARHR153700 Cardamine hirsuta
CARHR153720 Cardamine hirsuta
CARHR153730 Cardamine hirsuta
CARHR153740 Cardamine hirsuta
CARHR192380 Cardamine hirsuta
CARHR216540 Cardamine hirsuta
Carub.0005s0881 Capsella rubella
Carub.0006s1880 Capsella rubella
Carub.0008s1899 Capsella rubella
Ca_05997_v3 Cicer arietinum L.
Ca_05999_v3 Cicer arietinum L.
Ca_15161_v3 Cicer arietinum L.
Cc02_g05980 Coffea canephora
Cc06_g20020 Coffea canephora
CDE04G0926 Ceratophyllum demersum
Cfa001267 Carpinus fangiana
Ciclev10030786m.g Citrus clementina
Ciclev10033966m.g Citrus clementina
CiPaw.01G301800 Carya illinoinensis
ClCG07G004630 Citrullus lanatus
COL.COLO4_25795 Corchorus olitorius
Cpa.g.sc19.122 Carica papaya
Cpa.g.sc19.123 Carica papaya
CsaV3_5G010570 Cucumis sativus L.
CSS0025020 Camellia sinensis var. sinensis
CSS0048207 Camellia sinensis var. sinensis
DCAR_011852 Daucus carota
Duzib106G0872 Durio zibethinus
Duzib114G0648 Durio zibethinus
ECA233G5578 Erigeron canadensis
EL10Ac2g04901 Beta vulgaris
EL10Ac7g17401 Beta vulgaris
Eucgr.J00168 Eucalyptus grandis
FAN01G2255 Fragaria x ananassa
FAN03G2016 Fragaria x ananassa
FAN06G2284 Fragaria x ananassa
FAN10G2086 Fragaria x ananassa
FvH4_7g25190 Fragaria vesca
Glyma.02G261800 Glycine max
Glyma.18G023900 Glycine max
Glyma.U027200 Glycine max
Gohir.A06G160900 Gossypium hirsutum
Gohir.D06G166900 Gossypium hirsutum
Gorai.010G194700 Gossypium raimondii
GSVIVG01032746001 Vitis vinifera
HanXRQChr08g0221881 Helianthus annuus
Haze_17278 Corylus avellana
Haze_17287 Corylus avellana
Hma1.2p1_1013F.1_g247700 Hydrangea macrophylla
HPP92_003690 Vanilla planifolia
Hund13529 Selenicereus undatus
Lalb_Chr10g0105301 Lupinus albus
Lalb_Chr17g0346921 Lupinus albus
Lj1A961T79 Lonicera japonica
Lj1g0014164 Lotus japonicus
Lj1g0026032 Lotus japonicus
Lj4g0016792 Lotus japonicus
Lj6g0001238 Lotus japonicus
Lj6g0006147 Lotus japonicus
Lj6g0013892 Lotus japonicus
Lj8C62G8 Lonicera japonica
LjContig00357g0008885 Lotus japonicus
Lsat_1_v5_gn_8_13121 Lactuca sativa
Lsat_1_v5_gn_8_13481 Lactuca sativa
Manes.10G007800 Manihot esculenta
MBI04_g41683_MAGBIO Magnolia biondii
MBI04_g43202_MAGBIO Magnolia biondii
MBI04_g44602_MAGBIO Magnolia biondii
MBI04_g44603_MAGBIO Magnolia biondii
Medtr1g081750 Medicago truncatula
Medtr3g071660 Medicago truncatula
Medtr3g071860 Medicago truncatula
Medtr3g084600 Medicago truncatula
Medtr4g032945 Medicago truncatula
Medtr5g083300 Medicago truncatula
Medtr7g026550 Medicago truncatula
Medtr7g026610 Medicago truncatula
Medtr7g026620 Medicago truncatula
Medtr7g026650 Medicago truncatula
Medtr8g038125 Medicago truncatula
Medtr8g064220 Medicago truncatula
MELO3C018395.2 Cucumis melo
Migut.F00630 Erythranthe guttata
MSTRG.8922 Avicennia marina
Nitab4.5_0000058g0030 Nicotiana tabacum
Nitab4.5_0001817g0060 Nicotiana tabacum
Nn1g06958 Nelumbo nucifera
Nn1g09202 Nelumbo nucifera
Nn2g12181 Nelumbo nucifera
Nn2g14108 Nelumbo nucifera
Nn2g14179 Nelumbo nucifera
Nn2g15117 Nelumbo nucifera
Nn5g29006 Nelumbo nucifera
Nn6g34612 Nelumbo nucifera
Oeu023910.1 Olea europaea
Os07g0692600 Oryza sativa ssp. japonica
Peaxi162Scf00284g00316 Petunia axillaris
PGR044G2605 Punica granatum
PGSC0003DMG400023950 Solanum tuberosum
Phvul.001G246400 Phaseolus vulgaris
Phvul.008G220500 Phaseolus vulgaris
Potri.008G073500 Populus trichocarpa
Potri.010G183766 Populus trichocarpa
Potri.010G183799 Populus trichocarpa
Potri.010G183832 Populus trichocarpa
Prupe.2G256800 Prunus persica
Psat2g030640 Pisum sativum
Psat5g144960 Pisum sativum
PSO349G0143 Papaver somniferum
PSO349G0217 Papaver somniferum
PSO765G0016 Papaver somniferum
QL08p063892 Quercus lobata
RcHm_v2.0_Chr1g0371111 Rosa chinensis
Rhsim03G0147600 Rhododendron simsii
Rhsim09G0180400 Rhododendron simsii
Sabra08G0054700 Salix brachista
Sabra10G0141000 Salix brachista
Sc11g0005360 Simmondsia chinensis
Sc11g0005370 Simmondsia chinensis
Sed0016433 Sechium edule
SEGI_07300 Sequoiadendron giganteum
SGA_v2.0_scaffold437G51620 Striga asiatica
SGA_v2.0_scaffold618G53215 Striga asiatica
SHI28808 Sapria himalayana
SMO115G0151 Selaginella moellendorffii
Solyc06g050510.3 Solanum lycopersicum
Sopen06g016030 Solanum pennellii
Sp6g24000 Schrenkiella parvula
Sp7g16860 Schrenkiella parvula
TAR636G0222 Trochodendron aralioides
TAR636G1138 Trochodendron aralioides
THA.LOC104811007 Tarenaya hassleriana
Thecc.10G009700 Theobroma cacao
Thhalv10012460m.g Eutrema salsugineum
Thhalv10024231m.g Eutrema salsugineum
TPR.G10791 Trifolium pratense
TPR.G15465 Trifolium pratense
TPR.G18784 Trifolium pratense
TPR.G20505 Trifolium pratense
TPR.G27741 Trifolium pratense
TPR.G29786 Trifolium pratense
TPR.G30914 Trifolium pratense
TPR.G30921 Trifolium pratense
TPR.G34419 Trifolium pratense
TPR.G35061 Trifolium pratense
TPR.G40678 Trifolium pratense
TPR.G8343 Trifolium pratense
TWI73G1060 Tripterygium wilfordii
unitig_46.g18735 Utricularia gibba
vmacro06943 Vaccinium macrocarpon
vmacro09999 Vaccinium macrocarpon
vmacro10000 Vaccinium macrocarpon
VMungo0647G1332 Vigna mungo
Zm00001eb331510 Zea mays

User provided reference genes

Program Settings