Gene: Lsat_1_v5_gn_8_13481

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_13481
  • Transcript Identifier Lsat_1_v5_gn_8_13481.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 15545671-15549696 : positive

Gene Family Information

  • ID HOM05D000725
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_13481.v5
  • pacid 38954698

Descriptions

  • Description PTHR10799:SF660 - SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
IEA
InterProgene silencing by RNA-directed DNA methylation
GO:1900370
ISO
PLAZA Integrative Orthologypositive regulation of RNA interference AT3G42670
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT3G42670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G42670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000330 SNF2, N-terminal
IPR044567 SNF2 domain-containing protein CLSY/DRD1
Mapman id Description
12.5.1.10 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RDR2-polymerase accessory protein (CLSY1/2)