Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12860 Brassica napus
A08p15110 Brassica napus
A09p25820 Brassica napus
Aa31LG6G3570 Aethionema arabicum
Aa31LG9G9440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1300 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2425 Anthoceros agrestis
Actinidia05584 Actinidia chinensis
Actinidia11805 Actinidia chinensis
Actinidia24064 Actinidia chinensis
Ah.09g236060 Amaranthus hybridus
Ah.14g088960 Amaranthus hybridus
AL3G24960 Arabidopsis lyrata
AL6G48580 Arabidopsis lyrata
AL7G32460 Arabidopsis lyrata
Aqoxy1G02754 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0PJ706 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UIJ4RE Arachis hypogaea
AT4G05000 Arabidopsis thaliana
AT4G21560 Arabidopsis thaliana
ATR1149G025 Amborella trichopoda
Atru.chr10.1996 Acer truncatum
AUR62014727 Chenopodium quinoa
AUR62016909 Chenopodium quinoa
BcaB01g01862 Brassica carinata
BcaB03g11690 Brassica carinata
BcaC01g00693 Brassica carinata
BcaC04g21363 Brassica carinata
BcaNung02782 Brassica carinata
BcaNung02784 Brassica carinata
BcaNung02787 Brassica carinata
BolC1t01502H Brassica oleracea
BolC3t20607H Brassica oleracea
BolC9t56114H Brassica oleracea
BraA01t01230Z Brassica rapa
BraA08t33491Z Brassica rapa
BraA09t38152Z Brassica rapa
C01p15480 Brassica napus
C03p83260 Brassica napus
C09p32700 Brassica napus
CAN.G322.3 Capsicum annuum
CAN.G404.14 Capsicum annuum
CAN.G569.26 Capsicum annuum
CANSAT56G2779 Cannabis sativa
CARHR120800 Cardamine hirsuta
CARHR215970 Cardamine hirsuta
CARHR228240 Cardamine hirsuta
CARHR252530 Cardamine hirsuta
Carub.0006s3297 Capsella rubella
Carub.0007s1985 Capsella rubella
Ca_18491_v3 Cicer arietinum L.
Ca_29544_v3 Cicer arietinum L.
CBR_g51799 Chara braunii
Cc02_g11530 Coffea canephora
CDE02G0963 Ceratophyllum demersum
CDE02G3166 Ceratophyllum demersum
CDE11G0918 Ceratophyllum demersum
Cfa000362 Carpinus fangiana
Cfa023245 Carpinus fangiana
Ciclev10016702m.g Citrus clementina
CiPaw.09G158800 Carya illinoinensis
ClCG01G022650 Citrullus lanatus
COL.COLO4_31570 Corchorus olitorius
Cpa.g.c32257.1 Carica papaya
Cpa.g.c32972.1 Carica papaya
Cpa.g.sc1414.1 Carica papaya
Cpa.g.sc27.113 Carica papaya
Cre16.g678100 Chlamydomonas reinhardtii
CsaV3_6G049840 Cucumis sativus L.
CSS0014754 Camellia sinensis var. sinensis
DCAR_004200 Daucus carota
DCAR_008128 Daucus carota
Dinv39811 Davidia involucrata
Dinv40502 Davidia involucrata
Duzib160G0023 Durio zibethinus
Duzib192G0173 Durio zibethinus
Duzib235G0788 Durio zibethinus
ECA240G1907 Erigeron canadensis
EL10Ac8g20617 Beta vulgaris
EL10Ac9g22917 Beta vulgaris
Eucgr.D00708 Eucalyptus grandis
Eucgr.E03460 Eucalyptus grandis
FAN11G2070 Fragaria x ananassa
FAN12G1347 Fragaria x ananassa
FAN12G4105 Fragaria x ananassa
FAN16G3314 Fragaria x ananassa
FAN21G1434 Fragaria x ananassa
FAN22G2081 Fragaria x ananassa
FAN25G2192 Fragaria x ananassa
FvH4_3g04140 Fragaria vesca
FvH4_4g26030 Fragaria vesca
Glyma.07G191000 Glycine max
Glyma.08G058200 Glycine max
Gohir.A05G164900 Gossypium hirsutum
Gohir.A06G209300 Gossypium hirsutum
Gohir.A09G071000 Gossypium hirsutum
Gohir.A10G020300 Gossypium hirsutum
Gohir.D05G167900 Gossypium hirsutum
Gohir.D06G211700 Gossypium hirsutum
Gohir.D09G070800 Gossypium hirsutum
Gohir.D10G021100 Gossypium hirsutum
Gorai.006G085600 Gossypium raimondii
Gorai.009G173000 Gossypium raimondii
Gorai.010G254500 Gossypium raimondii
Gorai.011G022200 Gossypium raimondii
GSVIVG01006715001 Vitis vinifera
HanXRQChr06g0163981 Helianthus annuus
HanXRQChr12g0354091 Helianthus annuus
Haze_06563 Corylus avellana
Hma1.2p1_1363F.1_g278350 Hydrangea macrophylla
Lalb_Chr05g0218201 Lupinus albus
Lalb_Chr09g0327391 Lupinus albus
Lalb_Chr15g0090081 Lupinus albus
Lalb_Chr16g0383421 Lupinus albus
Lalb_Chr18g0059891 Lupinus albus
Lj1P1227T90 Lonicera japonica
Lj4g0020511 Lotus japonicus
Lsat_1_v5_gn_2_102821 Lactuca sativa
Lsat_1_v5_gn_5_141241 Lactuca sativa
Manes.17G039800 Manihot esculenta
Mapoly0186s0005 Marchantia polymorpha
MBI02_g35908_MAGBIO Magnolia biondii
MCO01G694 Micromonas commoda
MD05G1324500 Malus domestica
MD10G1302300 Malus domestica
Medtr4g090890 Medicago truncatula
MELO3C007312.2 Cucumis melo
Migut.M01295 Erythranthe guttata
MSTRG.13154 Avicennia marina
MSTRG.14644 Avicennia marina
MSTRG.7233 Avicennia marina
Nitab4.5_0002347g0010 Nicotiana tabacum
Nitab4.5_0003343g0050 Nicotiana tabacum
Nitab4.5_0003893g0020 Nicotiana tabacum
Nitab4.5_0009389g0010 Nicotiana tabacum
Nn1g03918 Nelumbo nucifera
Nn1g06746 Nelumbo nucifera
Oeu033054.1 Olea europaea
Oeu033889.1 Olea europaea
Os01g0781000 Oryza sativa ssp. japonica
Peaxi162Scf00079g00103 Petunia axillaris
Peaxi162Scf00262g00025 Petunia axillaris
PGR042G3105 Punica granatum
PGSC0003DMG400002086 Solanum tuberosum
PGSC0003DMG400011283 Solanum tuberosum
PGSC0003DMG400024059 Solanum tuberosum
Phvul.002G223000 Phaseolus vulgaris
Potri.004G035500 Populus trichocarpa
Potri.011G043800 Populus trichocarpa
Pp3c14_20060 Physcomitrium patens
Pp3c17_18750 Physcomitrium patens
PRCOL_00004236 Prasinoderma coloniale
Prupe.4G035900 Prunus persica
Psat7g110520 Pisum sativum
PSO210G7563 Papaver somniferum
PSO541G0607 Papaver somniferum
PSO675G2462 Papaver somniferum
PSO832G0607 Papaver somniferum
QL05p081861 Quercus lobata
RcHm_v2.0_Chr5g0006591 Rosa chinensis
Rhsim13G0173800 Rhododendron simsii
Sabra04G0021300 Salix brachista
Sabra11G0030400 Salix brachista
SalBow1G7462 Salvia bowleyana
SalBow4G0583 Salvia bowleyana
SalBow4G1647 Salvia bowleyana
SalBow6G7107 Salvia bowleyana
Sc05g0008040 Simmondsia chinensis
Sc05g0010020 Simmondsia chinensis
Sed0016121 Sechium edule
Sed0023652 Sechium edule
SEGI_02597 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18264 Striga asiatica
SGA_v2.0_scaffold89G27453 Striga asiatica
SHI02080 Sapria himalayana
SHI17543 Sapria himalayana
SMO137G0066 Selaginella moellendorffii
Solyc02g080270.3 Solanum lycopersicum
Solyc03g031750.2 Solanum lycopersicum
Sopen02g024980 Solanum pennellii
Sopen03g005610 Solanum pennellii
Sp6g03940 Schrenkiella parvula
Sp7g19690 Schrenkiella parvula
TAR624G0929 Trochodendron aralioides
TAR627G0574 Trochodendron aralioides
TAR629G1153 Trochodendron aralioides
THA.LOC104806278 Tarenaya hassleriana
THA.LOC104812756 Tarenaya hassleriana
Thecc.06G197700 Theobroma cacao
Thhalv10026248m.g Eutrema salsugineum
Thhalv10028962m.g Eutrema salsugineum
TPR.G32409 Trifolium pratense
TWI38G0839 Tripterygium wilfordii
TWI38G1155 Tripterygium wilfordii
TWI63G0283 Tripterygium wilfordii
unitig_26.g9391 Utricularia gibba
unitig_749.g13628 Utricularia gibba
VMungo0251G1450 Vigna mungo
Zm00001eb151450 Zea mays
Zm00001eb369840 Zea mays

User provided reference genes

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