Gene: Solyc02g080270.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g080270.3
  • Transcript Identifier Solyc02g080270.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 42527323-42530720 : negative

Gene Family Information

  • ID HOM05D003416
  • #Genes/#Species 200/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g080270.3.1
  • uniprot A0A3Q7F5L5
  • gene_id Solyc02g080270

Descriptions

  • Description Vacuolar protein sorting-associated protein 28 homolog (AHRD V3.3 *** A0A1U8FLJ7_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
GOA Databaseendosome transport via multivesicular body sorting pathway
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0015031
IEA
GOA Databaseprotein transport
GO:0043328
IBA
GOA Databaseprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044877
IBA
GOA Databaseprotein-containing complex binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000813
IBA
IEA
GOA DatabaseESCRT I complex
GO:0000813
IEA
InterProESCRT I complex
GO:0005768
IEA
GOA Databaseendosome
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G21560
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G21560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037206 VPS28, C-terminal domain superfamily
IPR038358 VPS28, N-terminal domain superfamily
IPR007143 Vacuolar protein sorting-associated Vps28
IPR037202 ESCRT assembly domain
Mapman id Description
22.4.1.1.2 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-I complex.component VPS28