Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05540 Brassica napus
A10p20300 Brassica napus
Aa31LG1G8820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3750 Anthoceros agrestis
Actinidia01818 Actinidia chinensis
Actinidia06965 Actinidia chinensis
Actinidia09259 Actinidia chinensis
Actinidia16384 Actinidia chinensis
Actinidia17692 Actinidia chinensis
Actinidia17947 Actinidia chinensis
Actinidia17948 Actinidia chinensis
Actinidia17949 Actinidia chinensis
Actinidia24454 Actinidia chinensis
Actinidia38162 Actinidia chinensis
Ah.04g150960 Amaranthus hybridus
Ah.06g194570 Amaranthus hybridus
AL6G30890 Arabidopsis lyrata
Aqoxy2G00385 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7N5RT2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.83X6NM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N51291 Arachis hypogaea
AT5G19400 Arabidopsis thaliana
ATR0800G115 Amborella trichopoda
Atru.chr3.2892 Acer truncatum
AUR62000193 Chenopodium quinoa
AUR62006543 Chenopodium quinoa
AUR62018344 Chenopodium quinoa
AUR62030323 Chenopodium quinoa
BcaC02g09615 Brassica carinata
BcaC03g13674 Brassica carinata
BcaC04g24233 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02470 Brassica napus
BolC9t58544H Brassica oleracea
BraA02t05505Z Brassica rapa
BraA10t44101Z Brassica rapa
C09p56900 Brassica napus
CAN.G128.68 Capsicum annuum
CAN.G2194.2 Capsicum annuum
CAN.G448.2 Capsicum annuum
CAN.G45.15 Capsicum annuum
CAN.G605.3 Capsicum annuum
CAN.G916.8 Capsicum annuum
CANSAT54G2892 Cannabis sativa
CARHR193550 Cardamine hirsuta
Carub.0006s1774 Capsella rubella
Ca_01866_v3 Cicer arietinum L.
Ca_06209_v3 Cicer arietinum L.
CBR_g38493 Chara braunii
Cc06_g19160 Coffea canephora
CDE01G0228 Ceratophyllum demersum
CDE01G0707 Ceratophyllum demersum
CDE12G0490 Ceratophyllum demersum
CDE12G0656 Ceratophyllum demersum
CDE12G0941 Ceratophyllum demersum
Cfa009857 Carpinus fangiana
Ciclev10014151m.g Citrus clementina
CiPaw.09G047400 Carya illinoinensis
CiPaw.13G150400 Carya illinoinensis
CiPaw.14G113000 Carya illinoinensis
ClCG03G012560 Citrullus lanatus
COL.COLO4_32762 Corchorus olitorius
Cpa.g.sc157.60 Carica papaya
Cre16.g648750 Chlamydomonas reinhardtii
CsaV3_1G043450 Cucumis sativus L.
CSS0033106 Camellia sinensis var. sinensis
CSS0047486 Camellia sinensis var. sinensis
CSS0047730 Camellia sinensis var. sinensis
DCAR_008578 Daucus carota
DCAR_008579 Daucus carota
DCAR_013639 Daucus carota
Dinv09713 Davidia involucrata
Dinv12046 Davidia involucrata
Dinv12047 Davidia involucrata
Dinv12048 Davidia involucrata
Dinv15036 Davidia involucrata
Duzib150G0706 Durio zibethinus
Duzib168G0131 Durio zibethinus
ECA238G4638 Erigeron canadensis
ECA248G1036 Erigeron canadensis
EL10Ac3g07233 Beta vulgaris
EL10Ac4g10118 Beta vulgaris
EL10Ac4g10138 Beta vulgaris
Eucgr.C04149 Eucalyptus grandis
Eucgr.C04150 Eucalyptus grandis
FAN11G3218 Fragaria x ananassa
FAN16G1122 Fragaria x ananassa
FAN18G1480 Fragaria x ananassa
FAN21G1175 Fragaria x ananassa
FAN25G3852 Fragaria x ananassa
FvH4_3g27840 Fragaria vesca
FvH4_5g27992 Fragaria vesca
FvH4_5g28300 Fragaria vesca
Glyma.02G279500 Glycine max
Glyma.07G231800 Glycine max
Glyma.20G040700 Glycine max
Gohir.A05G070900 Gossypium hirsutum
Gohir.A07G119450 Gossypium hirsutum
Gohir.A07G119500 Gossypium hirsutum
Gohir.A09G110450 Gossypium hirsutum
Gohir.A13G218800 Gossypium hirsutum
Gohir.D05G073800 Gossypium hirsutum
Gohir.D07G123700 Gossypium hirsutum
Gohir.D09G106800 Gossypium hirsutum
Gohir.D13G222500 Gossypium hirsutum
Gorai.001G133700 Gossypium raimondii
Gorai.006G124400 Gossypium raimondii
Gorai.009G074900 Gossypium raimondii
Gorai.013G253600 Gossypium raimondii
GSVIVG01033622001 Vitis vinifera
GSVIVG01037278001 Vitis vinifera
HanXRQChr03g0061551 Helianthus annuus
HanXRQChr04g0096761 Helianthus annuus
Haze_23231 Corylus avellana
HPP92_002978 Vanilla planifolia
HPP92_023797 Vanilla planifolia
Hund19098 Selenicereus undatus
Lalb_Chr04g0249221 Lupinus albus
Lalb_Chr10g0106241 Lupinus albus
Lalb_Chr17g0347901 Lupinus albus
Lj1C1093G8 Lonicera japonica
Lj2A818G16 Lonicera japonica
Lj6g0018672 Lotus japonicus
LjContig00564g0007413 Lotus japonicus
Lsat_1_v5_gn_2_36520 Lactuca sativa
Lsat_1_v5_gn_5_157981 Lactuca sativa
Manes.01G178600 Manihot esculenta
Manes.02G139200 Manihot esculenta
Mapoly0008s0008 Marchantia polymorpha
MBI14_g16108_MAGBIO Magnolia biondii
MBI15_g24196_MAGBIO Magnolia biondii
MBI15_g27550_MAGBIO Magnolia biondii
MD03G1165600 Malus domestica
MD11G1184900 Malus domestica
Medtr0175s0030 Medicago truncatula
Medtr5g089510 Medicago truncatula
Medtr7g033635 Medicago truncatula
MELO3C015113.2 Cucumis melo
Migut.J01661 Erythranthe guttata
Migut.K00132 Erythranthe guttata
MSTRG.10791 Avicennia marina
MSTRG.26156 Avicennia marina
Nitab4.5_0001052g0120 Nicotiana tabacum
Nitab4.5_0001408g0030 Nicotiana tabacum
Nitab4.5_0002181g0010 Nicotiana tabacum
Nitab4.5_0005263g0050 Nicotiana tabacum
Nn2g14811 Nelumbo nucifera
Nn7g36713 Nelumbo nucifera
Oeu021497.1 Olea europaea
Oeu021499.1 Olea europaea
Oeu022965.1 Olea europaea
Oeu057789.1 Olea europaea
Oeu057790.3 Olea europaea
Oeu063780.1 Olea europaea
Os08g0305300 Oryza sativa ssp. japonica
Peaxi162Scf00076g00523 Petunia axillaris
Peaxi162Scf00696g00316 Petunia axillaris
PGR102G3331 Punica granatum
PGSC0003DMG400012944 Solanum tuberosum
PGSC0003DMG400023698 Solanum tuberosum
Phvul.006G014200 Phaseolus vulgaris
Phvul.008G201200 Phaseolus vulgaris
Potri.001G275400 Populus trichocarpa
Potri.006G038500 Populus trichocarpa
Pp3c11_18290 Physcomitrium patens
Pp3c1_35310 Physcomitrium patens
Pp3c7_5420 Physcomitrium patens
Prupe.4G265800 Prunus persica
Psat0ss3759g0160 Pisum sativum
Psat5g197600 Pisum sativum
PSO339G3633 Papaver somniferum
PSO339G4474 Papaver somniferum
PSO384G2306 Papaver somniferum
PSO384G4955 Papaver somniferum
QL01p017120 Quercus lobata
QL07p010324 Quercus lobata
RcHm_v2.0_Chr5g0050561 Rosa chinensis
Rhsim03G0039500 Rhododendron simsii
Rhsim13G0209300 Rhododendron simsii
Sabra06G0025900 Salix brachista
Sabra16G0169700 Salix brachista
SalBow1G2870 Salvia bowleyana
SalBow1G3300 Salvia bowleyana
SalBow1G3831 Salvia bowleyana
SalBow6G4459 Salvia bowleyana
Sc16g0011040 Simmondsia chinensis
Sc16g0011050 Simmondsia chinensis
Sc25g0005440 Simmondsia chinensis
Sed0002335 Sechium edule
Sed0022809 Sechium edule
SEGI_09720 Sequoiadendron giganteum
SEGI_13447 Sequoiadendron giganteum
SEGI_30303 Sequoiadendron giganteum
SGA_v2.0_scaffold273G46398 Striga asiatica
SGA_v2.0_scaffold94G28533 Striga asiatica
SMO117G0112 Selaginella moellendorffii
SMO137G0188 Selaginella moellendorffii
Solyc10g080740.2 Solanum lycopersicum
Solyc12g019960.2 Solanum lycopersicum
Sopen10g031280 Solanum pennellii
Sopen12g010470 Solanum pennellii
Sp6g25010 Schrenkiella parvula
TAR369G0365 Trochodendron aralioides
TAR623G1343 Trochodendron aralioides
TAR633G1910 Trochodendron aralioides
TAR633G2268 Trochodendron aralioides
TAR636G1222 Trochodendron aralioides
THA.LOC104799125 Tarenaya hassleriana
THA.LOC104811190 Tarenaya hassleriana
Thecc.09G248200 Theobroma cacao
Thhalv10012551m.g Eutrema salsugineum
TPR.G15877 Trifolium pratense
TPR.G24344 Trifolium pratense
TWI53G1145 Tripterygium wilfordii
TWI74G0484 Tripterygium wilfordii
TWI74G0935 Tripterygium wilfordii
TWI77G0714 Tripterygium wilfordii
unitig_0.g2662 Utricularia gibba
unitig_748.g7225 Utricularia gibba
vmacro04032 Vaccinium macrocarpon
vmacro04033 Vaccinium macrocarpon
vmacro07792 Vaccinium macrocarpon
VMungo0540G0682 Vigna mungo
VMungo0647G1982 Vigna mungo
Zm00001eb097300 Zea mays
Zm00001eb308540 Zea mays

User provided reference genes

Program Settings