Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30290 Brassica napus
A03p50840 Brassica napus
A06p45710 Brassica napus
A08p13400 Brassica napus
Aa31LG6G630 Aethionema arabicum
Aa31LG9G6150 Aethionema arabicum
Actinidia09191 Actinidia chinensis
Actinidia14804 Actinidia chinensis
Ah.12g055090 Amaranthus hybridus
AL7G36630 Arabidopsis lyrata
AL8G11610 Arabidopsis lyrata
Aqoxy3G02342 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0EZ7EA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A7Q6YJ Arachis hypogaea
AT4G17895 Arabidopsis thaliana
AT5G46740 Arabidopsis thaliana
ATR0665G327 Amborella trichopoda
Atru.chr6.1699 Acer truncatum
Atru.chr6.1700 Acer truncatum
AUR62007296 Chenopodium quinoa
AUR62018709 Chenopodium quinoa
BcaB04g18449 Brassica carinata
BcaC03g16884 Brassica carinata
BcaC06g31452 Brassica carinata
BcaC06g33609 Brassica carinata
BcaC06g34352 Brassica carinata
BcaC07g38107 Brassica carinata
BcaNung06203 Brassica carinata
BolC2t10816H Brassica oleracea
BolC7t43544H Brassica oleracea
BolC7t45432H Brassica oleracea
BolC8t48530H Brassica oleracea
BraA02t08044Z Brassica rapa
BraA06t27440Z Brassica rapa
BraA08t33319Z Brassica rapa
C02p47810 Brassica napus
C07p30040 Brassica napus
C07p49220 Brassica napus
CAN.G1216.10 Capsicum annuum
CAN.G1216.12 Capsicum annuum
CAN.G1216.7 Capsicum annuum
CAN.G1216.8 Capsicum annuum
CAN.G1216.9 Capsicum annuum
CAN.G1470.1 Capsicum annuum
CAN.G1470.2 Capsicum annuum
CAN.G1470.3 Capsicum annuum
CAN.G1470.4 Capsicum annuum
CAN.G1644.2 Capsicum annuum
CAN.G1644.3 Capsicum annuum
CAN.G1644.4 Capsicum annuum
CAN.G1644.5 Capsicum annuum
CAN.G1644.6 Capsicum annuum
CAN.G1644.7 Capsicum annuum
CAN.G1644.8 Capsicum annuum
CAN.G1644.9 Capsicum annuum
CAN.G2007.1 Capsicum annuum
CAN.G2007.2 Capsicum annuum
CAN.G2007.3 Capsicum annuum
CAN.G2045.1 Capsicum annuum
CAN.G2097.2 Capsicum annuum
CAN.G2097.3 Capsicum annuum
CAN.G2230.1 Capsicum annuum
CAN.G2230.2 Capsicum annuum
CAN.G2526.1 Capsicum annuum
CAN.G2931.1 Capsicum annuum
CAN.G298.10 Capsicum annuum
CAN.G500.39 Capsicum annuum
CAN.G524.32 Capsicum annuum
CAN.G524.34 Capsicum annuum
CANSAT21G0911 Cannabis sativa
CARHR174760 Cardamine hirsuta
CARHR224620 Cardamine hirsuta
Carub.0007s2333 Capsella rubella
Carub.0007s2346 Capsella rubella
Carub.0008s0118 Capsella rubella
Ca_06082_v3 Cicer arietinum L.
Ca_22649_v3 Cicer arietinum L.
Cc08_g02820 Coffea canephora
CDE02G0013 Ceratophyllum demersum
CDE11G0268 Ceratophyllum demersum
Cfa012444 Carpinus fangiana
Ciclev10013784m.g Citrus clementina
CiPaw.11G093800 Carya illinoinensis
ClCG10G001570 Citrullus lanatus
COL.COLO4_17026 Corchorus olitorius
Cpa.g.sc227.5 Carica papaya
Cpa.g.sc227.6 Carica papaya
Cpa.g.sc227.7 Carica papaya
Cpa.g.sc552.1 Carica papaya
CsaV3_3G001680 Cucumis sativus L.
CSS0001118 Camellia sinensis var. sinensis
CSS0019337 Camellia sinensis var. sinensis
CSS0024654 Camellia sinensis var. sinensis
CSS0028098 Camellia sinensis var. sinensis
CSS0031291 Camellia sinensis var. sinensis
DCAR_005635 Daucus carota
DCAR_008266 Daucus carota
Dinv25218 Davidia involucrata
Duzib068G0882 Durio zibethinus
Duzib205G0116 Durio zibethinus
ECA246G4772 Erigeron canadensis
EL10Ac5g12115 Beta vulgaris
Eucgr.D02203 Eucalyptus grandis
FAN04G0675 Fragaria x ananassa
FAN08G1798 Fragaria x ananassa
FAN13G0520 Fragaria x ananassa
FAN18G2803 Fragaria x ananassa
FvH4_5g22140 Fragaria vesca
Glyma.01G018300 Glycine max
Glyma.09G204600 Glycine max
Gohir.A03G000400 Gossypium hirsutum
Gohir.A11G030700 Gossypium hirsutum
Gohir.D03G171800 Gossypium hirsutum
Gohir.D11G029400 Gossypium hirsutum
Gorai.003G182400 Gossypium raimondii
Gorai.007G032000 Gossypium raimondii
Gorai.011G148500 Gossypium raimondii
GSVIVG01013154001 Vitis vinifera
HanXRQChr06g0167511 Helianthus annuus
HanXRQChr17g0536271 Helianthus annuus
Haze_08220 Corylus avellana
Hma1.2p1_0574F.1_g181470 Hydrangea macrophylla
HPP92_014610 Vanilla planifolia
Hund14395 Selenicereus undatus
Lalb_Chr05g0216041 Lupinus albus
Lalb_Chr09g0325631 Lupinus albus
Lalb_Chr16g0381331 Lupinus albus
Lj2g0004513 Lotus japonicus
Lj4g0000907 Lotus japonicus
Lj6g0020608 Lotus japonicus
Lsat_1_v5_gn_3_17880 Lactuca sativa
Manes.17G010600 Manihot esculenta
MBI04_g23596_MAGBIO Magnolia biondii
MBI15_g01593_MAGBIO Magnolia biondii
MD06G1034700 Malus domestica
MD16G1273900 Malus domestica
Medtr0279s0020 Medicago truncatula
Medtr4g111860 Medicago truncatula
Medtr5g030360 Medicago truncatula
Medtr5g430360 Medicago truncatula
Medtr6g022290 Medicago truncatula
Medtr6g022300 Medicago truncatula
Medtr6g022310 Medicago truncatula
Medtr8g064910 Medicago truncatula
Medtr8g067060 Medicago truncatula
Medtr8g471100 Medicago truncatula
MELO3C013849.2 Cucumis melo
Migut.M00349 Erythranthe guttata
MSTRG.12161 Avicennia marina
Nitab4.5_0000804g0190 Nicotiana tabacum
Nitab4.5_0005013g0010 Nicotiana tabacum
Nitab4.5_0007629g0030 Nicotiana tabacum
Nn1g08036 Nelumbo nucifera
Oeu006254.1 Olea europaea
Os02g0693400 Oryza sativa ssp. japonica
Peaxi162Scf00045g00007 Petunia axillaris
Peaxi162Scf00460g00014 Petunia axillaris
PGR031G0806 Punica granatum
PGSC0003DMG400015934 Solanum tuberosum
PGSC0003DMG400017516 Solanum tuberosum
PGSC0003DMG400017850 Solanum tuberosum
PGSC0003DMG400037655 Solanum tuberosum
PGSC0003DMG400039510 Solanum tuberosum
PGSC0003DMG400042692 Solanum tuberosum
PGSC0003DMG400043162 Solanum tuberosum
PGSC0003DMG400045991 Solanum tuberosum
Phvul.002G141300 Phaseolus vulgaris
Potri.001G142000 Populus trichocarpa
Potri.003G092400 Populus trichocarpa
Prupe.5G035200 Prunus persica
Psat2g135360 Pisum sativum
Psat2g136280 Pisum sativum
Psat4g121120 Pisum sativum
PSO063G2316 Papaver somniferum
PSO782G0103 Papaver somniferum
QL12p005097 Quercus lobata
RcHm_v2.0_Chr7g0209791 Rosa chinensis
Rhsim07G0127600 Rhododendron simsii
Rhsim11G0015700 Rhododendron simsii
Sabra01G0110400 Salix brachista
Sabra03G0061800 Salix brachista
SalBow1G7469 Salvia bowleyana
SalBow6G1214 Salvia bowleyana
Sc07g0008680 Simmondsia chinensis
Sed0017947 Sechium edule
Sed0023966 Sechium edule
SEGI_20474 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41098 Striga asiatica
SGA_v2.0_scaffold36G14310 Striga asiatica
Solyc02g005000.1 Solanum lycopersicum
Solyc02g005600.1 Solanum lycopersicum
Solyc08g005080.2 Solanum lycopersicum
Solyc08g021790.1 Solanum lycopersicum
Solyc08g021830.1 Solanum lycopersicum
Solyc08g023360.3 Solanum lycopersicum
Solyc08g048310.3 Solanum lycopersicum
Solyc08g048410.2 Solanum lycopersicum
Solyc08g076910.3 Solanum lycopersicum
Solyc09g015580.1 Solanum lycopersicum
Solyc09g015600.3 Solanum lycopersicum
Solyc09g015610.1 Solanum lycopersicum
Solyc09g017980.2 Solanum lycopersicum
Solyc09g017990.3 Solanum lycopersicum
Solyc10g047480.1 Solanum lycopersicum
Sopen02g001010 Solanum pennellii
Sopen08g001100 Solanum pennellii
Sopen08g015660 Solanum pennellii
Sopen08g025480 Solanum pennellii
Sopen09g010320 Solanum pennellii
Sopen10g017710 Solanum pennellii
Sp2g11550 Schrenkiella parvula
Sp5g02200 Schrenkiella parvula
Sp7g16220 Schrenkiella parvula
SpUn0036_0060 Schrenkiella parvula
TAR375G1111 Trochodendron aralioides
THA.LOC104806712 Tarenaya hassleriana
THA.LOC104827757 Tarenaya hassleriana
Thecc.03G227100 Theobroma cacao
Thhalv10000790m.g Eutrema salsugineum
Thhalv10002775m.g Eutrema salsugineum
Thhalv10024586m.g Eutrema salsugineum
TPR.G1020 Trifolium pratense
TWI15G0289 Tripterygium wilfordii
unitig_37.g12115 Utricularia gibba
unitig_92.g28137 Utricularia gibba
vmacro00327 Vaccinium macrocarpon
vmacro04396 Vaccinium macrocarpon
vmacro14171 Vaccinium macrocarpon
VMungo1215G2088 Vigna mungo
Zm00001eb187750 Zea mays
Zm00001eb251290 Zea mays
Zm00001eb390390 Zea mays

User provided reference genes

Program Settings