Gene: Solyc02g005600.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g005600.1
  • Transcript Identifier Solyc02g005600.1.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 9593124-9596394 : positive

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g005600.1.1
  • uniprot K4B4G0
  • gene_id Solyc02g005600

Descriptions

  • Description Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G3AFL7_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IBA
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0004197
IBA
GOA Databasecysteine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
35.1 not assigned.annotated