Gene: AT4G17895

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17895
  • Transcript Identifier AT4G17895.1
  • Gene Type Coding gene
  • Location Chr4 : 9939914-9942698 : positive

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17895.1
  • symbol UBP20
  • uniprot Q9FPS7

Descriptions

  • Description ubiquitin-specific protease 20
  • Computational description ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process
GO:0016579
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IBA
Gene Ontologyprotein deubiquitination1
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity1
GO:0004843
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
35.1 not assigned.annotated