Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p25870 Brassica napus
A05p00310 Brassica napus
Aa31LG1G28960 Aethionema arabicum
Aa31LG9G13540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2671 Anthoceros agrestis
Actinidia15525 Actinidia chinensis
Actinidia17078 Actinidia chinensis
Actinidia25555 Actinidia chinensis
AL4G29280 Arabidopsis lyrata
AL4G47200 Arabidopsis lyrata
Aqoxy5G03263 Aquilegia oxysepala
Aqoxy7G04038 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L2XFJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0U0UU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4A4ZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6G03S Arachis hypogaea
AT2G33610 Arabidopsis thaliana
AT2G47620 Arabidopsis thaliana
ATR0582G358 Amborella trichopoda
ATR0605G189 Amborella trichopoda
Atru.chr13.59 Acer truncatum
Atru.chr6.1852 Acer truncatum
AUR62024095 Chenopodium quinoa
AUR62029578 Chenopodium quinoa
AUR62035171 Chenopodium quinoa
AUR62038849 Chenopodium quinoa
BcaB01g03164 Brassica carinata
BcaB06g28706 Brassica carinata
BcaC01g05026 Brassica carinata
BcaC02g07806 Brassica carinata
BcaC02g12553 Brassica carinata
BolC4t27786H Brassica oleracea
BraA03t11817Z Brassica rapa
BraA04t18089Z Brassica rapa
BraA05t19028Z Brassica rapa
C04p00220 Brassica napus
C04p63140 Brassica napus
CAN.G1330.12 Capsicum annuum
CAN.G732.17 Capsicum annuum
CANSAT78G2419 Cannabis sativa
CANSAT80G1097 Cannabis sativa
CARHR127630 Cardamine hirsuta
CARHR143020 Cardamine hirsuta
Carub.0004s1524 Capsella rubella
Carub.0004s3035 Capsella rubella
Ca_15384_v3 Cicer arietinum L.
Ca_16061_v3 Cicer arietinum L.
Cc07_g20270 Coffea canephora
Cc10_g00250 Coffea canephora
CDE02G4665 Ceratophyllum demersum
CDE05G0552 Ceratophyllum demersum
CDE05G3146 Ceratophyllum demersum
CDE06G0841 Ceratophyllum demersum
Cfa018763 Carpinus fangiana
Ciclev10001069m.g Citrus clementina
Ciclev10031125m.g Citrus clementina
CiPaw.07G133400 Carya illinoinensis
CiPaw.11G004600 Carya illinoinensis
ClCG06G018080 Citrullus lanatus
ClCG11G019090 Citrullus lanatus
COL.COLO4_12297 Corchorus olitorius
COL.COLO4_16638 Corchorus olitorius
COL.COLO4_28628 Corchorus olitorius
Cpa.g.c40216 Carica papaya
Cpa.g.sc26.13 Carica papaya
Cpa.g.sc4.159 Carica papaya
Cpa.g.sc4.161 Carica papaya
CsaV3_1G000390 Cucumis sativus L.
CsaV3_4G037680 Cucumis sativus L.
CSS0022286 Camellia sinensis var. sinensis
CSS0035387 Camellia sinensis var. sinensis
CSS0037280 Camellia sinensis var. sinensis
DCAR_007508 Daucus carota
DCAR_023022 Daucus carota
Dinv11194 Davidia involucrata
Dinv13759 Davidia involucrata
Dinv23175 Davidia involucrata
Dinv23176 Davidia involucrata
Dinv29376 Davidia involucrata
Duzib041G0437 Durio zibethinus
Duzib116G0376 Durio zibethinus
Duzib205G1530 Durio zibethinus
ECA232G0657 Erigeron canadensis
ECA232G3427 Erigeron canadensis
EL10Ac1g01870 Beta vulgaris
EL10Ac5g11385 Beta vulgaris
Eucgr.F01821 Eucalyptus grandis
Eucgr.K03476 Eucalyptus grandis
FAN02G2510 Fragaria x ananassa
FAN04G3103 Fragaria x ananassa
FAN08G3680 Fragaria x ananassa
FAN09G1227 Fragaria x ananassa
FAN11G3394 Fragaria x ananassa
FAN13G0558 Fragaria x ananassa
FAN16G1176 Fragaria x ananassa
FAN18G0786 Fragaria x ananassa
FAN18G4410 Fragaria x ananassa
FAN21G0065 Fragaria x ananassa
FAN21G0171 Fragaria x ananassa
FAN25G2536 Fragaria x ananassa
FvH4_3g02280 Fragaria vesca
FvH4_5g08750 Fragaria vesca
Glyma.04G014400 Glycine max
Glyma.04G243100 Glycine max
Glyma.06G014400 Glycine max
Glyma.06G120200 Glycine max
Gohir.A05G177500 Gossypium hirsutum
Gohir.A12G190900 Gossypium hirsutum
Gohir.D05G180900 Gossypium hirsutum
Gohir.D12G193000 Gossypium hirsutum
Gorai.008G207800 Gossypium raimondii
Gorai.009G185900 Gossypium raimondii
GSVIVG01008584001 Vitis vinifera
GSVIVG01013428001 Vitis vinifera
HanXRQChr09g0241911 Helianthus annuus
HanXRQChr09g0273481 Helianthus annuus
Haze_07177 Corylus avellana
Haze_07190 Corylus avellana
Haze_22864 Corylus avellana
Hma1.2p1_0014F.1_g009160 Hydrangea macrophylla
Hma1.2p1_0489F.1_g164120 Hydrangea macrophylla
HPP92_011484 Vanilla planifolia
HPP92_011546 Vanilla planifolia
HPP92_013560 Vanilla planifolia
Hund01833 Selenicereus undatus
Hund14302 Selenicereus undatus
Lalb_Chr11g0061371 Lupinus albus
Lalb_Chr11g0069411 Lupinus albus
Lj1g0013977 Lotus japonicus
Lj1g0025049 Lotus japonicus
Lj4A811T124 Lonicera japonica
Lj5C93G3 Lonicera japonica
Lsat_1_v5_gn_4_82541 Lactuca sativa
Lsat_1_v5_gn_9_48340 Lactuca sativa
Manes.06G122300 Manihot esculenta
Manes.14G048701 Manihot esculenta
Manes.18G001900 Manihot esculenta
Mapoly0079s0052 Marchantia polymorpha
MBI01_g28403_MAGBIO Magnolia biondii
MBI07_g02002_MAGBIO Magnolia biondii
MBI07_g36514_MAGBIO Magnolia biondii
MBI07_g40341_MAGBIO Magnolia biondii
MD00G1206800 Malus domestica
MD05G1344100 Malus domestica
MD06G1137800 Malus domestica
MD10G1320100 Malus domestica
MD14G1152600 Malus domestica
Medtr3g099000 Medicago truncatula
Medtr3g116120 Medicago truncatula
Medtr5g085170 Medicago truncatula
Medtr6g053260 Medicago truncatula
MELO3C017062.2 Cucumis melo
MELO3C026190.2 Cucumis melo
Migut.I00558 Erythranthe guttata
Migut.N02988 Erythranthe guttata
MSTRG.11263 Avicennia marina
MSTRG.24517 Avicennia marina
Nitab4.5_0000021g1050 Nicotiana tabacum
Nitab4.5_0001756g0010 Nicotiana tabacum
Nitab4.5_0002530g0070 Nicotiana tabacum
Nn3g16379 Nelumbo nucifera
Nn6g31623 Nelumbo nucifera
Oeu030664.1 Olea europaea
Oeu039085.1 Olea europaea
Oeu061132.1 Olea europaea
Os02g0194000 Oryza sativa ssp. japonica
Os04g0480300 Oryza sativa ssp. japonica
Peaxi162Scf00385g00010 Petunia axillaris
Peaxi162Scf00516g00329 Petunia axillaris
PGR083G0789 Punica granatum
PGR083G2801 Punica granatum
PGSC0003DMG400009998 Solanum tuberosum
PGSC0003DMG400032483 Solanum tuberosum
Phvul.009G008500 Phaseolus vulgaris
Phvul.009G132800 Phaseolus vulgaris
Potri.002G004800 Populus trichocarpa
Potri.015G100400 Populus trichocarpa
Pp3c2_24980 Physcomitrium patens
Prupe.4G022300 Prunus persica
Prupe.5G005400 Prunus persica
Prupe.5G147600 Prunus persica
Psat2g065040 Pisum sativum
Psat5g008520 Pisum sativum
Psat5g052400 Pisum sativum
PSO017G1827 Papaver somniferum
PSO478G1861 Papaver somniferum
PSO541G2552 Papaver somniferum
PSO675G0227 Papaver somniferum
QL02p015747 Quercus lobata
QL10p002118 Quercus lobata
QL10p002155 Quercus lobata
RcHm_v2.0_Chr5g0003401 Rosa chinensis
RcHm_v2.0_Chr7g0189531 Rosa chinensis
Rhsim06G0003100 Rhododendron simsii
Rhsim08G0192700 Rhododendron simsii
Sabra02G0003200 Salix brachista
Sabra15G0121000 Salix brachista
SalBow5G3382 Salvia bowleyana
SalBow6G3244 Salvia bowleyana
Sc10g0010540 Simmondsia chinensis
Sc15g0004060 Simmondsia chinensis
Sed0018640 Sechium edule
Sed0024397 Sechium edule
SEGI_10759 Sequoiadendron giganteum
SEGI_11956 Sequoiadendron giganteum
SEGI_32604 Sequoiadendron giganteum
SEGI_40040 Sequoiadendron giganteum
SGA_v2.0_scaffold188G40322 Striga asiatica
SGA_v2.0_scaffold220G42645 Striga asiatica
SGA_v2.0_scaffold227G43162 Striga asiatica
SHI07950 Sapria himalayana
SMO144G0098 Selaginella moellendorffii
Solyc03g097450.4 Solanum lycopersicum
Solyc04g082760.3 Solanum lycopersicum
Sopen03g028220 Solanum pennellii
Sopen04g036400 Solanum pennellii
Sp4g15960 Schrenkiella parvula
Sp4g29560 Schrenkiella parvula
TAR376G1201 Trochodendron aralioides
TAR622G1388 Trochodendron aralioides
THA.LOC104802175 Tarenaya hassleriana
THA.LOC104806869 Tarenaya hassleriana
Thecc.03G133900 Theobroma cacao
Thecc.08G099700 Theobroma cacao
Thhalv10001411m.g Eutrema salsugineum
Thhalv10016607m.g Eutrema salsugineum
TPR.G21957 Trifolium pratense
TPR.G38238 Trifolium pratense
TWI14G1104 Tripterygium wilfordii
TWI23G0477 Tripterygium wilfordii
TWI36G1461 Tripterygium wilfordii
unitig_578.g16240 Utricularia gibba
unitig_61.g26206 Utricularia gibba
vmacro19136 Vaccinium macrocarpon
vmacro19137 Vaccinium macrocarpon
vmacro21766 Vaccinium macrocarpon
VMungo1309G1952 Vigna mungo
VMungo1309G2971 Vigna mungo
Zm00001eb079510 Zea mays
Zm00001eb197340 Zea mays
Zm00001eb197350 Zea mays
Zm00001eb206120 Zea mays
Zm00001eb359880 Zea mays
Zm00001eb359890 Zea mays

User provided reference genes

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