Gene: Sopen03g028220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028220
  • Transcript Identifier Sopen03g028220.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 63826900-63837984 : negative

Gene Family Information

  • ID HOM05D001065
  • #Genes/#Species 574/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028220.1

Descriptions

  • Description Homologous to yeast SWI3 and a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3C, the other two members of the SWI3 family. | SWITCH/sucrose nonfermenting 3A (SWI3A) | FUNCTIONS IN: DNA binding | INVOLVED IN: chromatin remodeling | LOCATED IN: SWI/SNF complex | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , SWIRM , SANT, eukarya | BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os04g0480300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR032451 SMARCC, C-terminal
IPR007526 SWIRM domain
Mapman id Description
12.4.1.1.2 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component SWI3