Gene: Sopen04g036400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g036400
  • Transcript Identifier Sopen04g036400.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 77042725-77046887 : negative

Gene Family Information

  • ID HOM05D001065
  • #Genes/#Species 574/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g036400.1

Descriptions

  • Description Homologous to yeast SWI3, RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously. | switch subunit 3 (SWI3B) | FUNCTIONS IN: DNA binding | INVOLVED IN: chromatin remodeling | LOCATED IN: SWI/SNF complex, nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , SWIRM , SANT, eukarya | BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G33610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR007526 SWIRM domain
IPR017930 Myb domain
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
12.4.1.1.2 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component SWI3