Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19850 Brassica napus
A06p36230 Brassica napus
A10p26320 Brassica napus
Aa31LG3G15760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.145 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4237 Anthoceros agrestis
Actinidia07321 Actinidia chinensis
Actinidia13287 Actinidia chinensis
Actinidia15709 Actinidia chinensis
Actinidia21947 Actinidia chinensis
Ah.03g137670 Amaranthus hybridus
Ah.09g224690 Amaranthus hybridus
Ah.09g224710 Amaranthus hybridus
AL4G17160 Arabidopsis lyrata
AL6G22090 Arabidopsis lyrata
AL6G37320 Arabidopsis lyrata
Aqoxy1G02257 Aquilegia oxysepala
Aqoxy7G03629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8TMD5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YCI793 Arachis hypogaea
AT2G25640 Arabidopsis thaliana
AT3G29639 Arabidopsis thaliana
AT5G11430 Arabidopsis thaliana
AT5G25520 Arabidopsis thaliana
ATR0037G033 Amborella trichopoda
ATR0037G038 Amborella trichopoda
ATR0772G192 Amborella trichopoda
ATR0800G121 Amborella trichopoda
Atru.chr7.2327 Acer truncatum
AUR62011180 Chenopodium quinoa
AUR62013303 Chenopodium quinoa
AUR62024841 Chenopodium quinoa
AUR62032378 Chenopodium quinoa
BcaB06g28082 Brassica carinata
BcaB08g37060 Brassica carinata
BcaC02g08335 Brassica carinata
BcaC03g16292 Brassica carinata
BcaC04g19228 Brassica carinata
BolC2t10104H Brassica oleracea
BolC2t10185H Brassica oleracea
BolC2t10186H Brassica oleracea
BolC4t27082H Brassica oleracea
BolC7t44759H Brassica oleracea
BraA04t17572Z Brassica rapa
BraA06t26545Z Brassica rapa
BraA10t44689Z Brassica rapa
C02p40870 Brassica napus
C02p41690 Brassica napus
C04p55580 Brassica napus
C07p42300 Brassica napus
C09p65430 Brassica napus
CAN.G21.2 Capsicum annuum
CAN.G763.6 Capsicum annuum
CAN.G763.7 Capsicum annuum
CAN.G763.8 Capsicum annuum
CANSAT25G0565 Cannabis sativa
CARHR115650 Cardamine hirsuta
CARHR187860 Cardamine hirsuta
CARHR187870 Cardamine hirsuta
CARHR201800 Cardamine hirsuta
Carub.0006s2338 Capsella rubella
Ca_15699_v3 Cicer arietinum L.
Cc08_g08330 Coffea canephora
CDE04G1135 Ceratophyllum demersum
CDE06G0534 Ceratophyllum demersum
CDE06G1195 Ceratophyllum demersum
CDE06G1812 Ceratophyllum demersum
CDE07G1548 Ceratophyllum demersum
Cfa002924 Carpinus fangiana
Cfa013207 Carpinus fangiana
Ciclev10007403m.g Citrus clementina
Ciclev10007677m.g Citrus clementina
CiPaw.03G248900 Carya illinoinensis
CiPaw.07G217900 Carya illinoinensis
CiPaw.08G015500 Carya illinoinensis
ClCG05G017190 Citrullus lanatus
COL.COLO4_24054 Corchorus olitorius
Cpa.g.sc46.47 Carica papaya
Cpa.g.sc91.11 Carica papaya
Cre02.g073250 Chlamydomonas reinhardtii
CsaV3_3G046670 Cucumis sativus L.
CSS0009859 Camellia sinensis var. sinensis
CSS0015137 Camellia sinensis var. sinensis
CSS0017448 Camellia sinensis var. sinensis
CSS0021250 Camellia sinensis var. sinensis
CSS0035862 Camellia sinensis var. sinensis
CSS0041569 Camellia sinensis var. sinensis
DCAR_023265 Daucus carota
Dinv30213 Davidia involucrata
Dinv41472 Davidia involucrata
Duzib150G0475 Durio zibethinus
Duzib168G1962 Durio zibethinus
Duzib187G0318 Durio zibethinus
Duzib187G1951 Durio zibethinus
ECA234G1222 Erigeron canadensis
ECA240G4010 Erigeron canadensis
EL10Ac2g02541 Beta vulgaris
EL10Ac8g18730 Beta vulgaris
Eucgr.C01815 Eucalyptus grandis
FAN15G0271 Fragaria x ananassa
FAN20G1668 Fragaria x ananassa
FAN24G3197 Fragaria x ananassa
FAN27G2221 Fragaria x ananassa
FvH4_2g30140 Fragaria vesca
Glyma.04G071900 Glycine max
Glyma.06G073200 Glycine max
Gohir.A05G010400 Gossypium hirsutum
Gohir.A06G053600 Gossypium hirsutum
Gohir.A08G237100 Gossypium hirsutum
Gohir.D05G011200 Gossypium hirsutum
Gohir.D06G052900 Gossypium hirsutum
Gohir.D08G257700 Gossypium hirsutum
Gorai.004G274700 Gossypium raimondii
Gorai.009G011500 Gossypium raimondii
Gorai.010G061400 Gossypium raimondii
GSVIVG01015599001 Vitis vinifera
GSVIVG01015600001 Vitis vinifera
GSVIVG01035723001 Vitis vinifera
HanXRQChr03g0078061 Helianthus annuus
HanXRQChr12g0356791 Helianthus annuus
HanXRQChr13g0409611 Helianthus annuus
Haze_21621 Corylus avellana
Haze_25496 Corylus avellana
Haze_25497 Corylus avellana
Hma1.2p1_0497F.1_g166410 Hydrangea macrophylla
HPP92_010519 Vanilla planifolia
HPP92_014684 Vanilla planifolia
Lalb_Chr08g0234601 Lupinus albus
Lalb_Chr08g0243801 Lupinus albus
Lalb_Chr11g0063981 Lupinus albus
Lj1g0004393 Lotus japonicus
Lj6g0021163 Lotus japonicus
Lj7A713T53 Lonicera japonica
Lsat_1_v5_gn_1_50961 Lactuca sativa
Lsat_1_v5_gn_1_50981 Lactuca sativa
Lsat_1_v5_gn_5_93901 Lactuca sativa
Manes.03G065000 Manihot esculenta
Manes.06G046500 Manihot esculenta
Mapoly0098s0013 Marchantia polymorpha
MCO11G327 Micromonas commoda
MD08G1136900 Malus domestica
MD15G1115600 Malus domestica
Medtr1g063780 Medicago truncatula
Medtr3g108010 Medicago truncatula
Medtr6g033205 Medicago truncatula
MELO3C003671.2 Cucumis melo
Migut.A00276 Erythranthe guttata
MSTRG.11738 Avicennia marina
MSTRG.14000 Avicennia marina
Nitab4.5_0000125g0300 Nicotiana tabacum
Nitab4.5_0000374g0120 Nicotiana tabacum
Nitab4.5_0000374g0130 Nicotiana tabacum
Nitab4.5_0003393g0030 Nicotiana tabacum
Nitab4.5_0006579g0010 Nicotiana tabacum
Nn2g11838 Nelumbo nucifera
Nn8g39282 Nelumbo nucifera
Nn8g39562 Nelumbo nucifera
Oeu014658.2 Olea europaea
Oeu052756.1 Olea europaea
Oeu052757.1 Olea europaea
Os02g0208600 Oryza sativa ssp. japonica
Os04g0644675 Oryza sativa ssp. japonica
Os06g0595900 Oryza sativa ssp. japonica
Peaxi162Scf00088g01215 Petunia axillaris
Peaxi162Scf00088g01216 Petunia axillaris
Peaxi162Scf00105g01432 Petunia axillaris
PGR031G3499 Punica granatum
PGSC0003DMG400006706 Solanum tuberosum
PGSC0003DMG400033626 Solanum tuberosum
Phvul.009G097700 Phaseolus vulgaris
Potri.006G246800 Populus trichocarpa
Potri.018G034500 Populus trichocarpa
Potri.018G125500 Populus trichocarpa
Potri.T125307 Populus trichocarpa
Pp3c15_21040 Physcomitrium patens
Pp3c9_22950 Physcomitrium patens
PRCOL_00003318 Prasinoderma coloniale
Prupe.7G018800 Prunus persica
Psat1g023960 Pisum sativum
Psat1g024000 Pisum sativum
Psat1g127320 Pisum sativum
Psat5g027640 Pisum sativum
PSO017G1142 Papaver somniferum
PSO170G1884 Papaver somniferum
QL02p089967 Quercus lobata
QL02p090013 Quercus lobata
QL02p090018 Quercus lobata
QL12p031313 Quercus lobata
RcHm_v2.0_Chr6g0312791 Rosa chinensis
Rhsim01G0061100 Rhododendron simsii
Rhsim02G0187500 Rhododendron simsii
Sabra06G0193100 Salix brachista
Sabra18G0035100 Salix brachista
Sabra18G0106800 Salix brachista
SalBow4G2455 Salvia bowleyana
SalBow8G1653 Salvia bowleyana
SalBow8G2039 Salvia bowleyana
Sc09g0008850 Simmondsia chinensis
Sc18g0000310 Simmondsia chinensis
Sed0012229 Sechium edule
Sed0020655 Sechium edule
SEGI_27893 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05598 Striga asiatica
SGA_v2.0_scaffold27G11488 Striga asiatica
SHI09800 Sapria himalayana
SHI16426 Sapria himalayana
SHI18615 Sapria himalayana
SHI18616 Sapria himalayana
SHI18617 Sapria himalayana
SHI19950 Sapria himalayana
SHI22498 Sapria himalayana
SHI25697 Sapria himalayana
SHI25701 Sapria himalayana
SHI41184 Sapria himalayana
SHI41186 Sapria himalayana
SMO200G0185 Selaginella moellendorffii
Solyc07g007840.3 Solanum lycopersicum
Solyc07g007850.2 Solanum lycopersicum
Solyc08g067790.4 Solanum lycopersicum
Sopen07g003740 Solanum pennellii
Sopen08g021720 Solanum pennellii
Sp4g05210 Schrenkiella parvula
Sp6g32170 Schrenkiella parvula
TAR383G1012 Trochodendron aralioides
TAR624G0964 Trochodendron aralioides
TAR624G0993 Trochodendron aralioides
TAR636G3294 Trochodendron aralioides
THA.LOC104799220 Tarenaya hassleriana
THA.LOC104815043 Tarenaya hassleriana
THA.LOC104819888 Tarenaya hassleriana
Thecc.09G133300 Theobroma cacao
Thecc.09G144400 Theobroma cacao
Thhalv10000617m.g Eutrema salsugineum
Thhalv10012648m.g Eutrema salsugineum
TPR.G34688 Trifolium pratense
TPR.G9542 Trifolium pratense
TWI32G0172 Tripterygium wilfordii
unitig_578.g16600 Utricularia gibba
unitig_85.g27160 Utricularia gibba
vmacro05445 Vaccinium macrocarpon
vmacro07728 Vaccinium macrocarpon
vmacro11116 Vaccinium macrocarpon
VMungo1309G0300 Vigna mungo
Zm00001eb205470 Zea mays
Zm00001eb240410 Zea mays

User provided reference genes

Program Settings