Gene: Sopen08g021720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g021720
  • Transcript Identifier Sopen08g021720.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 61004121-61008398 : negative

Gene Family Information

  • ID HOM05D003107
  • #Genes/#Species 220/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g021720.1

Descriptions

  • Description SPOC domain / Transcription elongation factor S-II protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal , Transcription elongation factor S-IIM , Transcription elongation factor S-II, central domain | BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012921 Spen paralogue and orthologue SPOC, C-terminal
IPR036575 Transcription elongation factor S-II, central domain superfamily
IPR003618 Transcription elongation factor S-II, central domain
Mapman id Description
15.3.7.1 RNA biosynthesis.RNA polymerase II-dependent transcription.upstream transcription pausing.regulatory protein (BDR)