Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38740 Brassica napus
A06p37350 Brassica napus
Aa31LG11G9510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1440 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2372 Anthoceros agrestis
Actinidia03922 Actinidia chinensis
Actinidia03924 Actinidia chinensis
Actinidia16034 Actinidia chinensis
Actinidia36571 Actinidia chinensis
Actinidia37818 Actinidia chinensis
Ah.12g061740 Amaranthus hybridus
Ah.12g061760 Amaranthus hybridus
AL6G39200 Arabidopsis lyrata
Aqoxy2G00581 Aquilegia oxysepala
Aqoxy6G01148 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7G7S7J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EEI187 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FX2G1C Arachis hypogaea
AT5G27740 Arabidopsis thaliana
ATR0568G141 Amborella trichopoda
ATR0697G074 Amborella trichopoda
Atru.chr2.1514 Acer truncatum
Atru.chr3.617 Acer truncatum
Atru.chr3.618 Acer truncatum
AUR62038453 Chenopodium quinoa
AUR62042150 Chenopodium quinoa
BcaB04g19686 Brassica carinata
BcaB07g34200 Brassica carinata
BcaC03g17801 Brassica carinata
BolC2t11892H Brassica oleracea
BolC7t44638H Brassica oleracea
BraA02t08851Z Brassica rapa
BraA06t26658Z Brassica rapa
C02p58260 Brassica napus
C05p57190 Brassica napus
C07p41110 Brassica napus
CAN.G1336.4 Capsicum annuum
CAN.G358.59 Capsicum annuum
CAN.G959.51 Capsicum annuum
CANSAT01G3259 Cannabis sativa
CANSAT54G0333 Cannabis sativa
CARHR186260 Cardamine hirsuta
Carub.0006s2482 Capsella rubella
Ca_11698_v3 Cicer arietinum L.
Ca_24869_v3 Cicer arietinum L.
Ca_25350_v3 Cicer arietinum L.
CBR_g29296 Chara braunii
Cc06_g21450 Coffea canephora
Cc07_g09770 Coffea canephora
CDE06G2247 Ceratophyllum demersum
CDE07G1554 Ceratophyllum demersum
Cfa004333 Carpinus fangiana
Cfa017715 Carpinus fangiana
Cfa025645 Carpinus fangiana
Ciclev10020854m.g Citrus clementina
Ciclev10024944m.g Citrus clementina
CiPaw.02G019500 Carya illinoinensis
CiPaw.09G166800 Carya illinoinensis
ClCG01G019690 Citrullus lanatus
ClCG04G004690 Citrullus lanatus
COL.COLO4_22048 Corchorus olitorius
COL.COLO4_28637 Corchorus olitorius
Cpa.g.sc15.66 Carica papaya
Cpa.g.sc161.34 Carica papaya
Cpa.g.sc6.141 Carica papaya
Cre16.g679950 Chlamydomonas reinhardtii
CsaV3_4G031600 Cucumis sativus L.
CsaV3_6G046400 Cucumis sativus L.
CSS0012592 Camellia sinensis var. sinensis
CSS0031386 Camellia sinensis var. sinensis
DCAR_013487 Daucus carota
DCAR_025953 Daucus carota
Dinv13503 Davidia involucrata
Dinv25044 Davidia involucrata
Dinv40001 Davidia involucrata
Duzib128G0536 Durio zibethinus
Duzib147G0909 Durio zibethinus
Duzib177G0529 Durio zibethinus
Duzib264G0068 Durio zibethinus
ECA232G3627 Erigeron canadensis
ECA238G2580 Erigeron canadensis
EL10Ac5g11694 Beta vulgaris
Eucgr.A02136 Eucalyptus grandis
Eucgr.A02138 Eucalyptus grandis
Eucgr.H03317 Eucalyptus grandis
FAN02G2150 Fragaria x ananassa
FAN07G0041 Fragaria x ananassa
FAN14G2403 Fragaria x ananassa
FAN15G0323 Fragaria x ananassa
FAN15G0949 Fragaria x ananassa
FAN19G1137 Fragaria x ananassa
FAN20G1512 Fragaria x ananassa
FAN23G0213 Fragaria x ananassa
FAN23G0682 Fragaria x ananassa
FAN24G3538 Fragaria x ananassa
FAN26G2681 Fragaria x ananassa
FAN28G0904 Fragaria x ananassa
FvH4_1g12990 Fragaria vesca
FvH4_1g23560 Fragaria vesca
FvH4_2g04970 Fragaria vesca
FvH4_7g02410 Fragaria vesca
Glyma.01G172500 Glycine max
Glyma.05G089100 Glycine max
Glyma.11G070700 Glycine max
Gohir.A02G166600 Gossypium hirsutum
Gohir.A11G229200 Gossypium hirsutum
Gohir.A12G063900 Gossypium hirsutum
Gohir.A13G163700 Gossypium hirsutum
Gohir.D03G013400 Gossypium hirsutum
Gohir.D11G241300 Gossypium hirsutum
Gohir.D12G063800 Gossypium hirsutum
Gohir.D13G166600 Gossypium hirsutum
Gorai.003G013700 Gossypium raimondii
Gorai.007G255400 Gossypium raimondii
Gorai.008G067000 Gossypium raimondii
Gorai.013G195900 Gossypium raimondii
GSVIVG01018933001 Vitis vinifera
GSVIVG01022436001 Vitis vinifera
HanXRQChr07g0196281 Helianthus annuus
HanXRQChr09g0242001 Helianthus annuus
HanXRQChr09g0261371 Helianthus annuus
HanXRQChr11g0325471 Helianthus annuus
HanXRQChr11g0325481 Helianthus annuus
HanXRQChr14g0433601 Helianthus annuus
HanXRQChr14g0453631 Helianthus annuus
Haze_15069 Corylus avellana
Haze_20410 Corylus avellana
Haze_26788 Corylus avellana
HPP92_015892 Vanilla planifolia
Lalb_Chr02g0157371 Lupinus albus
Lj1A1072T25 Lonicera japonica
Lj2C455T8 Lonicera japonica
Lj2g0000438 Lotus japonicus
Lj2g0025638 Lotus japonicus
Lj4A204T64 Lonicera japonica
Lsat_1_v5_gn_2_103681 Lactuca sativa
Lsat_1_v5_gn_4_152521 Lactuca sativa
Lsat_1_v5_gn_5_115280 Lactuca sativa
Manes.01G137000 Manihot esculenta
Manes.08G153200 Manihot esculenta
Mapoly0170s0033 Marchantia polymorpha
MBI01_g21128_MAGBIO Magnolia biondii
MBI10_g18272_MAGBIO Magnolia biondii
MCO13G013 Micromonas commoda
MD02G1144400 Malus domestica
MD04G1041000 Malus domestica
MD04G1041300 Malus domestica
MD12G1011300 Malus domestica
MD15G1258100 Malus domestica
Medtr5g020810 Medicago truncatula
Medtr6g027590 Medicago truncatula
Medtr6g471010 Medicago truncatula
MELO3C007837.2 Cucumis melo
MELO3C008864.2 Cucumis melo
Migut.H02534 Erythranthe guttata
Migut.J01540 Erythranthe guttata
Migut.L00022 Erythranthe guttata
MSTRG.6253 Avicennia marina
Nitab4.5_0000121g0030 Nicotiana tabacum
Nitab4.5_0000178g0240 Nicotiana tabacum
Nitab4.5_0000344g0190 Nicotiana tabacum
Nitab4.5_0002915g0020 Nicotiana tabacum
Nitab4.5_0007490g0030 Nicotiana tabacum
Nitab4.5_0007770g0010 Nicotiana tabacum
Nitab4.5_0009998g0010 Nicotiana tabacum
Nitab4.5_0009998g0020 Nicotiana tabacum
Nn2g14554 Nelumbo nucifera
Oeu012897.2 Olea europaea
Oeu025183.1 Olea europaea
Oeu025184.1 Olea europaea
Oeu052789.1 Olea europaea
Os02g0704966 Oryza sativa ssp. japonica
Os03g0792600 Oryza sativa ssp. japonica
Peaxi162Scf00010g01213 Petunia axillaris
Peaxi162Scf00010g01323 Petunia axillaris
Peaxi162Scf00258g00523 Petunia axillaris
Peaxi162Scf00258g00524 Petunia axillaris
Peaxi162Scf00366g00531 Petunia axillaris
Peaxi162Scf00366g00532 Petunia axillaris
PGR042G3124 Punica granatum
PGR102G2818 Punica granatum
Phvul.002G032800 Phaseolus vulgaris
Phvul.004G076500 Phaseolus vulgaris
Potri.005G120901 Populus trichocarpa
Potri.007G022900 Populus trichocarpa
Potri.019G040000 Populus trichocarpa
Pp3c25_5630 Physcomitrium patens
PRCOL_00007014 Prasinoderma coloniale
Prupe.1G194700 Prunus persica
Prupe.4G268900 Prunus persica
Prupe.7G013300 Prunus persica
Prupe.7G157200 Prunus persica
Psat1g030560 Pisum sativum
Psat1g091400 Pisum sativum
Psat2g158040 Pisum sativum
PSO339G1619 Papaver somniferum
PSO384G1286 Papaver somniferum
PSO541G0976 Papaver somniferum
PSO675G4582 Papaver somniferum
QL06p046951 Quercus lobata
QL07p018995 Quercus lobata
RcHm_v2.0_Chr2g0101071 Rosa chinensis
RcHm_v2.0_Chr3g0496081 Rosa chinensis
Rhsim03G0049600 Rhododendron simsii
Sabra19G0050300 Salix brachista
SalBow5G0358 Salvia bowleyana
SalBow5G2022 Salvia bowleyana
SalBow6G4052 Salvia bowleyana
SalBow6G6368 Salvia bowleyana
Sc22g0003180 Simmondsia chinensis
Sed0014260 Sechium edule
Sed0019827 Sechium edule
SEGI_03673 Sequoiadendron giganteum
SEGI_07940 Sequoiadendron giganteum
SEGI_23362 Sequoiadendron giganteum
SEGI_29081 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22376 Striga asiatica
SGA_v2.0_scaffold69G23218 Striga asiatica
SMO228G0056 Selaginella moellendorffii
SMO271G0133 Selaginella moellendorffii
Solyc01g020220.3 Solanum lycopersicum
Solyc01g020440.3 Solanum lycopersicum
Solyc02g085060.2 Solanum lycopersicum
Sopen01g010500 Solanum pennellii
Sopen01g014330 Solanum pennellii
Sopen01g015760 Solanum pennellii
Sopen02g029760 Solanum pennellii
Sp2g20910 Schrenkiella parvula
TAR381G1572 Trochodendron aralioides
TAR623G1140 Trochodendron aralioides
TAR625G0256 Trochodendron aralioides
THA.LOC104824562 Tarenaya hassleriana
Thecc.01G032400 Theobroma cacao
Thecc.05G242500 Theobroma cacao
Thhalv10004490m.g Eutrema salsugineum
Thhalv10005385m.g Eutrema salsugineum
TPR.G2334 Trifolium pratense
TPR.G2395 Trifolium pratense
TPR.G25364 Trifolium pratense
TWI32G1012 Tripterygium wilfordii
TWI53G0889 Tripterygium wilfordii
unitig_21.g20661 Utricularia gibba
vmacro07653 Vaccinium macrocarpon
VMungo0464G0076 Vigna mungo
VMungo1215G0025 Vigna mungo
VMungo1215G3194 Vigna mungo
Zm00001eb060330 Zea mays
Zm00001eb188350 Zea mays
Zm00001eb213170 Zea mays

User provided reference genes

Program Settings