Gene: Sopen01g010500
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g010500
- Transcript Identifier Sopen01g010500.2
- Gene Type Coding gene
- Location Spenn-ch01 : 22033775-22045836 : positive
Gene Family Information
- ID HOM05D001900
- #Genes/#Species 347/98
- Phylogenetic origin
- ID ORTHO05D003003
- #Genes/#Species 249/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g010500.2
Descriptions
- Description A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. | EMBRYO DEFECTIVE 2775 (EMB2775) | FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , DNA polymerase III, clamp-loader complex, subunit E, C-terminal , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal | BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G27740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.2.3.4.2.3 | Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC3 |