Gene: AT5G27740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27740
  • Transcript Identifier AT5G27740.1
  • Gene Type Coding gene
  • Location Chr5 : 9823831-9826869 : positive

Gene Family Information

  • ID HOM05D001900
  • #Genes/#Species 347/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27740.1
  • symbol EMB2775
  • Alias EMB161,EMBRYO DEFECTIVE 161,EMB251,EMBRYO DEFECTIVE 251,RFC3,replication factor C 3
  • full_name EMBRYO DEFECTIVE 2775
  • uniprot Q8VXX4

Descriptions

  • Description ATPase family associated with various cellular activities (AAA)
  • Computational description EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy
GO:0006261
IBA
Gene OntologyDNA-dependent DNA replication1
GO:0006281
IBA
Gene OntologyDNA repair1
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003689
IBA
Gene OntologyDNA clamp loader activity1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005663
IBA
Gene OntologyDNA replication factor C complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Mapman id Description
13.2.3.4.2.3 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC3