Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42180 Brassica napus
A03p03110 Brassica napus
A04p31640 Brassica napus
A05p02300 Brassica napus
A09p07570 Brassica napus
A10p28950 Brassica napus
Aa31LG11G1390 Aethionema arabicum
Aa31LG1G23490 Aethionema arabicum
Aa31LG3G19170 Aethionema arabicum
Actinidia21986 Actinidia chinensis
Actinidia30541 Actinidia chinensis
Actinidia40472 Actinidia chinensis
Ah.14g079790 Amaranthus hybridus
AL4G39560 Arabidopsis lyrata
AL6G17410 Arabidopsis lyrata
AL8G39020 Arabidopsis lyrata
AL8G39030 Arabidopsis lyrata
Aqoxy7G02184 Aquilegia oxysepala
Aqoxy7G03703 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FS32P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3J2MYH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LIRE4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMQR93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGBG9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM6BPF Arachis hypogaea
AT2G41475 Arabidopsis thaliana
AT5G07190 Arabidopsis thaliana
AT5G62200 Arabidopsis thaliana
AT5G62210 Arabidopsis thaliana
ATR1120G157 Amborella trichopoda
Atru.chr1.2998 Acer truncatum
Atru.chr1.610 Acer truncatum
BcaB01g06032 Brassica carinata
BcaB07g29789 Brassica carinata
BcaB07g29790 Brassica carinata
BcaC03g18135 Brassica carinata
BcaC03g18137 Brassica carinata
BcaC04g23423 Brassica carinata
BcaC06g32465 Brassica carinata
BcaC06g32466 Brassica carinata
BcaNung01406 Brassica carinata
BolC2t12263H Brassica oleracea
BolC2t12264H Brassica oleracea
BolC3t12894H Brassica oleracea
BolC3t18728H Brassica oleracea
BolC4t21914H Brassica oleracea
BolC4t28404H Brassica oleracea
BolC9t53757H Brassica oleracea
BolC9t59674H Brassica oleracea
BraA02t09147Z Brassica rapa
BraA02t09148Z Brassica rapa
BraA03t09668Z Brassica rapa
BraA04t18622Z Brassica rapa
BraA05t19225Z Brassica rapa
BraA10t44942Z Brassica rapa
C02p62030 Brassica napus
C02p62040 Brassica napus
C03p03510 Brassica napus
C03p64690 Brassica napus
C04p02740 Brassica napus
C04p69070 Brassica napus
C09p08490 Brassica napus
C09p69300 Brassica napus
CAN.G407.95 Capsicum annuum
CAN.G798.15 Capsicum annuum
CAN.G798.16 Capsicum annuum
CANSAT21G2107 Cannabis sativa
CANSAT56G0855 Cannabis sativa
CARHR136590 Cardamine hirsuta
CARHR205950 Cardamine hirsuta
CARHR205960 Cardamine hirsuta
CARHR275990 Cardamine hirsuta
Carub.0004s2377 Capsella rubella
Carub.0006s0612 Capsella rubella
Carub.0008s2289 Capsella rubella
Carub.0008s2290 Capsella rubella
Ca_10832_v3 Cicer arietinum L.
Cc04_g04230 Coffea canephora
Cc06_g08490 Coffea canephora
CDE06G2009 Ceratophyllum demersum
Ciclev10005897m.g Citrus clementina
Ciclev10006003m.g Citrus clementina
Ciclev10009669m.g Citrus clementina
Ciclev10026660m.g Citrus clementina
CiPaw.03G098300 Carya illinoinensis
ClCG05G007550 Citrullus lanatus
ClCG05G007560 Citrullus lanatus
ClCG05G007570 Citrullus lanatus
ClCG07G012680 Citrullus lanatus
COL.COLO4_12943 Corchorus olitorius
COL.COLO4_14202 Corchorus olitorius
Cpa.g.sc3.254 Carica papaya
Cpa.g.sc75.26 Carica papaya
CsaV3_3G016450 Cucumis sativus L.
CsaV3_3G016460 Cucumis sativus L.
CsaV3_4G001510 Cucumis sativus L.
DCAR_025505 Daucus carota
Duzib068G1270 Durio zibethinus
Duzib084G0294 Durio zibethinus
Duzib192G0269 Durio zibethinus
Duzib235G0839 Durio zibethinus
ECA232G3997 Erigeron canadensis
EL10Ac8g18658 Beta vulgaris
Eucgr.A02867 Eucalyptus grandis
Eucgr.F02528 Eucalyptus grandis
Eucgr.J03061 Eucalyptus grandis
FAN02G1869 Fragaria x ananassa
FAN03G0491 Fragaria x ananassa
FAN03G1813 Fragaria x ananassa
FAN05G2553 Fragaria x ananassa
FAN06G0686 Fragaria x ananassa
FAN06G4829 Fragaria x ananassa
FAN09G4531 Fragaria x ananassa
FAN10G0638 Fragaria x ananassa
FvH4_6g29960 Fragaria vesca
FvH4_7g28400 Fragaria vesca
Glyma.09G151900 Glycine max
Glyma.10G242000 Glycine max
Glyma.13G363800 Glycine max
Glyma.13G364801 Glycine max
Glyma.15G008800 Glycine max
Glyma.16G202000 Glycine max
Glyma.16G202500 Glycine max
Glyma.20G152100 Glycine max
Gohir.A05G125700 Gossypium hirsutum
Gohir.A05G125866 Gossypium hirsutum
Gohir.D05G126700 Gossypium hirsutum
Gohir.D12G263833 Gossypium hirsutum
Gorai.008G282900 Gossypium raimondii
Gorai.009G130700 Gossypium raimondii
GSVIVG01018477001 Vitis vinifera
GSVIVG01018478001 Vitis vinifera
HanXRQChr10g0303001 Helianthus annuus
Haze_13811 Corylus avellana
Hma1.2p1_0018F.1_g012390 Hydrangea macrophylla
Hma1.2p1_0515F.1_g170130 Hydrangea macrophylla
HPP92_000668 Vanilla planifolia
Hund09243 Selenicereus undatus
Lalb_Chr03g0033001 Lupinus albus
Lalb_Chr03g0033011 Lupinus albus
Lalb_Chr06g0160841 Lupinus albus
Lalb_Chr19g0131251 Lupinus albus
Lalb_Chr22g0350891 Lupinus albus
Lalb_Chr22g0350901 Lupinus albus
Lj2g0018359 Lotus japonicus
Lj3g0003878 Lotus japonicus
Lj3g0018692 Lotus japonicus
Lj5C70T11 Lonicera japonica
Lsat_1_v5_gn_4_88960 Lactuca sativa
Lsat_1_v5_gn_4_89020 Lactuca sativa
Lsat_1_v5_gn_5_131260 Lactuca sativa
Manes.04G114400 Manihot esculenta
Manes.07G106000 Manihot esculenta
Manes.14G031901 Manihot esculenta
Manes.14G132300 Manihot esculenta
MBI04_g38656_MAGBIO Magnolia biondii
MBI14_g16338_MAGBIO Magnolia biondii
MBI14_g46136_MAGBIO Magnolia biondii
MD00G1023000 Malus domestica
MD00G1023100 Malus domestica
MD01G1187700 Malus domestica
MD02G1031500 Malus domestica
MD07G1259800 Malus domestica
Medtr0050s0240 Medicago truncatula
Medtr1g102420 Medicago truncatula
Medtr2g103303 Medicago truncatula
Medtr2g103307 Medicago truncatula
Medtr2g103313 Medicago truncatula
Medtr2g103330 Medicago truncatula
Medtr2g103360 Medicago truncatula
Medtr2g103670 Medicago truncatula
MELO3C006843.2 Cucumis melo
MELO3C006844.2 Cucumis melo
MELO3C006845.2 Cucumis melo
MELO3C017889.2 Cucumis melo
Migut.I00781 Erythranthe guttata
Migut.K00480 Erythranthe guttata
MSTRG.22732 Avicennia marina
Nitab4.5_0000024g0220 Nicotiana tabacum
Nitab4.5_0001250g0010 Nicotiana tabacum
Nn2g12032 Nelumbo nucifera
Nn4g25984 Nelumbo nucifera
Nn8g39453 Nelumbo nucifera
Oeu049186.1 Olea europaea
Os01g0172800 Oryza sativa ssp. japonica
Os05g0171200 Oryza sativa ssp. japonica
Peaxi162Scf00148g00114 Petunia axillaris
Peaxi162Scf00332g00768 Petunia axillaris
PGR031G1653 Punica granatum
PGR042G1649 Punica granatum
PGSC0003DMG400000634 Solanum tuberosum
PGSC0003DMG400023797 Solanum tuberosum
PGSC0003DMG400023798 Solanum tuberosum
Phvul.004G125300 Phaseolus vulgaris
Phvul.004G125400 Phaseolus vulgaris
Phvul.005G175450 Phaseolus vulgaris
Phvul.005G177100 Phaseolus vulgaris
Phvul.007G063600 Phaseolus vulgaris
Potri.001G193500 Populus trichocarpa
Potri.006G069800 Populus trichocarpa
Potri.012G130800 Populus trichocarpa
Potri.012G130900 Populus trichocarpa
Potri.015G132700 Populus trichocarpa
Potri.015G132900 Populus trichocarpa
Potri.018G131800 Populus trichocarpa
Prupe.2G284100 Prunus persica
Prupe.3G084200 Prunus persica
Prupe.7G243200 Prunus persica
Psat1g115720 Pisum sativum
Psat5g300280 Pisum sativum
Psat5g300320 Pisum sativum
Psat5g300880 Pisum sativum
Psat5g300920 Pisum sativum
Psat5g300960 Pisum sativum
Psat5g301440 Pisum sativum
Psat5g301880 Pisum sativum
Psat6g203680 Pisum sativum
Psat7g030920 Pisum sativum
PSO170G1098 Papaver somniferum
PSO339G5748 Papaver somniferum
PSO384G0990 Papaver somniferum
PSO455G0274 Papaver somniferum
QL01p011565 Quercus lobata
QL05p028937 Quercus lobata
QL12p039215 Quercus lobata
RcHm_v2.0_Chr1g0375361 Rosa chinensis
RcHm_v2.0_Chr2g0135961 Rosa chinensis
Rhsim08G0214200 Rhododendron simsii
Sabra06G0052100 Salix brachista
Sabra12G0098500 Salix brachista
Sabra15G0145300 Salix brachista
SalBow2G1796 Salvia bowleyana
Sc04g0004600 Simmondsia chinensis
Sc18g0000610 Simmondsia chinensis
Sed0000479 Sechium edule
Sed0008007 Sechium edule
Sed0010780 Sechium edule
Sed0018265 Sechium edule
Sed0023521 Sechium edule
SEGI_12747 Sequoiadendron giganteum
SEGI_17058 Sequoiadendron giganteum
SEGI_40906 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02678 Striga asiatica
Solyc01g104020.2 Solanum lycopersicum
Solyc03g116590.3 Solanum lycopersicum
Sopen01g046420 Solanum pennellii
Sopen01g046430 Solanum pennellii
Sopen03g035500 Solanum pennellii
Sp2g25400 Schrenkiella parvula
Sp2g25410 Schrenkiella parvula
Sp4g23740 Schrenkiella parvula
Sp6g35700 Schrenkiella parvula
Sp6g35710 Schrenkiella parvula
TAR383G0395 Trochodendron aralioides
TAR645G0001 Trochodendron aralioides
TAR645G0006 Trochodendron aralioides
THA.LOC104815278 Tarenaya hassleriana
THA.LOC104824839 Tarenaya hassleriana
THA.LOC104824840 Tarenaya hassleriana
Thecc.03G163700 Theobroma cacao
Thecc.06G021100 Theobroma cacao
Thhalv10004875m.g Eutrema salsugineum
Thhalv10004970m.g Eutrema salsugineum
Thhalv10015927m.g Eutrema salsugineum
Thhalv10015930m.g Eutrema salsugineum
Thhalv10017295m.g Eutrema salsugineum
TPR.G24658 Trifolium pratense
TPR.G26127 Trifolium pratense
TPR.G33098 Trifolium pratense
TPR.G37157 Trifolium pratense
TPR.G37165 Trifolium pratense
TPR.G37175 Trifolium pratense
TPR.G37183 Trifolium pratense
TPR.G37187 Trifolium pratense
TPR.G37267 Trifolium pratense
TPR.G37272 Trifolium pratense
TPR.G608 Trifolium pratense
TPR.G7033 Trifolium pratense
TPR.G7034 Trifolium pratense
TWI18G0686 Tripterygium wilfordii
TWI23G0455 Tripterygium wilfordii
unitig_22.g6612 Utricularia gibba
vmacro18984 Vaccinium macrocarpon
VMungo0464G0837 Vigna mungo
VMungo0464G2024 Vigna mungo
VMungo0720G0371 Vigna mungo
Zm00001eb336790 Zea mays

User provided reference genes

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