Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42440 Brassica napus
A02p43740 Brassica napus
A04p13020 Brassica napus
A06p19830 Brassica napus
A09p07750 Brassica napus
Aa31LG11G1080 Aethionema arabicum
Aa31LG1G16780 Aethionema arabicum
Aa31LG4G16470 Aethionema arabicum
Aa31LG9G1520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1601 Anthoceros agrestis
Actinidia06041 Actinidia chinensis
Actinidia33331 Actinidia chinensis
Actinidia33332 Actinidia chinensis
Actinidia36061 Actinidia chinensis
Ah.16g106980 Amaranthus hybridus
AL3G50650 Arabidopsis lyrata
AL5G27110 Arabidopsis lyrata
AL7G24120 Arabidopsis lyrata
AL7G49900 Arabidopsis lyrata
AL8G39450 Arabidopsis lyrata
AL8G42720 Arabidopsis lyrata
Aqoxy1G01478 Aquilegia oxysepala
Aqoxy3G00880 Aquilegia oxysepala
Aqoxy3G03104 Aquilegia oxysepala
AT3G47820 Arabidopsis thaliana
AT5G40140 Arabidopsis thaliana
AT5G62560 Arabidopsis thaliana
AT5G65200 Arabidopsis thaliana
ATR0057G060 Amborella trichopoda
ATR0152G024 Amborella trichopoda
ATR0180G007 Amborella trichopoda
ATR0559G185 Amborella trichopoda
ATR1149G023 Amborella trichopoda
Atru.chr8.2417 Acer truncatum
Atru.chr9.2405 Acer truncatum
AUR62008281 Chenopodium quinoa
AUR62032080 Chenopodium quinoa
AUR62041853 Chenopodium quinoa
BcaB01g00873 Brassica carinata
BcaB02g09162 Brassica carinata
BcaB02g09163 Brassica carinata
BcaB02g09164 Brassica carinata
BcaB06g27218 Brassica carinata
BcaB06g27451 Brassica carinata
BcaB07g29848 Brassica carinata
BcaC01g01773 Brassica carinata
BcaC02g12503 Brassica carinata
BcaC03g18164 Brassica carinata
BcaC03g18313 Brassica carinata
BcaC03g18314 Brassica carinata
BcaC03g18315 Brassica carinata
BcaC03g18317 Brassica carinata
BcaC04g23407 Brassica carinata
BcaC06g35610 Brassica carinata
BcaNung01390 Brassica carinata
BcaNung01391 Brassica carinata
BcaNung01394 Brassica carinata
BolC2t12290H Brassica oleracea
BolC2t12456H Brassica oleracea
BolC3t19503H Brassica oleracea
BolC4t26267H Brassica oleracea
BolC9t53776H Brassica oleracea
BraA02t09175Z Brassica rapa
BraA02t09298Z Brassica rapa
BraA04t16963Z Brassica rapa
BraA06t25061Z Brassica rapa
BraA09t36423Z Brassica rapa
C02p62330 Brassica napus
C02p63880 Brassica napus
C03p72040 Brassica napus
C04p46800 Brassica napus
C09p08650 Brassica napus
CAN.G206.57 Capsicum annuum
CAN.G853.12 Capsicum annuum
CANSAT25G2570 Cannabis sativa
CANSAT80G2042 Cannabis sativa
CARHR156500 Cardamine hirsuta
CARHR261970 Cardamine hirsuta
CARHR276340 Cardamine hirsuta
CARHR279110 Cardamine hirsuta
Carub.0005s1393 Capsella rubella
Carub.0007s3554 Capsella rubella
Carub.0008s2323 Capsella rubella
Carub.0008s2604 Capsella rubella
Ca_04225_v3 Cicer arietinum L.
Ca_16208_v3 Cicer arietinum L.
Cc04_g13540 Coffea canephora
Cc07_g02600 Coffea canephora
CDE04G3470 Ceratophyllum demersum
Cfa007469 Carpinus fangiana
Cfa019069 Carpinus fangiana
Ciclev10011415m.g Citrus clementina
Ciclev10019643m.g Citrus clementina
CiPaw.03G034600 Carya illinoinensis
CiPaw.11G031500 Carya illinoinensis
CiPaw.12G023300 Carya illinoinensis
ClCG01G014110 Citrullus lanatus
ClCG06G016710 Citrullus lanatus
COL.COLO4_06150 Corchorus olitorius
Cpa.g.sc14.85 Carica papaya
Cpa.g.sc35.60 Carica papaya
CsaV3_1G001800 Cucumis sativus L.
CsaV3_1G008240 Cucumis sativus L.
CsaV3_5G037460 Cucumis sativus L.
CSS0017083 Camellia sinensis var. sinensis
CSS0035950 Camellia sinensis var. sinensis
DCAR_000285 Daucus carota
DCAR_013980 Daucus carota
DCAR_016505 Daucus carota
Dinv20696 Davidia involucrata
Dinv33526 Davidia involucrata
Dinv35022 Davidia involucrata
Duzib068G0980 Durio zibethinus
Duzib084G0245 Durio zibethinus
Duzib147G1483 Durio zibethinus
Duzib187G1895 Durio zibethinus
Duzib205G0953 Durio zibethinus
ECA232G2746 Erigeron canadensis
ECA232G2930 Erigeron canadensis
EL10Ac2g03385 Beta vulgaris
EL10Ac5g10825 Beta vulgaris
Eucgr.B00340 Eucalyptus grandis
Eucgr.I01874 Eucalyptus grandis
Eucgr.K02878 Eucalyptus grandis
FAN02G1524 Fragaria x ananassa
FAN02G2609 Fragaria x ananassa
FAN04G1723 Fragaria x ananassa
FAN05G2933 Fragaria x ananassa
FAN08G0536 Fragaria x ananassa
FAN09G0967 Fragaria x ananassa
FAN09G2357 Fragaria x ananassa
FAN13G1329 Fragaria x ananassa
FAN14G5528 Fragaria x ananassa
FAN16G1865 Fragaria x ananassa
FAN16G1996 Fragaria x ananassa
FAN16G2539 Fragaria x ananassa
FAN18G4395 Fragaria x ananassa
FAN22G0629 Fragaria x ananassa
FAN25G1503 Fragaria x ananassa
FAN27G0185 Fragaria x ananassa
FvH4_5g16420 Fragaria vesca
FvH4_6g50090 Fragaria vesca
Glyma.04G179300 Glycine max
Glyma.06G185400 Glycine max
Glyma.13G069300 Glycine max
Glyma.19G013500 Glycine max
Gohir.A07G217800 Gossypium hirsutum
Gohir.A08G212200 Gossypium hirsutum
Gohir.D07G224900 Gossypium hirsutum
Gohir.D08G229200 Gossypium hirsutum
Gorai.001G259300 Gossypium raimondii
Gorai.004G243400 Gossypium raimondii
GSVIVG01032537001 Vitis vinifera
HanXRQChr04g0100131 Helianthus annuus
HanXRQChr09g0271781 Helianthus annuus
HanXRQChr15g0488401 Helianthus annuus
Haze_07440 Corylus avellana
Haze_14628 Corylus avellana
Hma1.2p1_0002F.1_g002790 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139050 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139070 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139072 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139074 Hydrangea macrophylla
Hma1.2p1_0697F.1_g205020 Hydrangea macrophylla
Hma1.2p1_0697F.1_g205030 Hydrangea macrophylla
Hma1.2p1_1975F.1_g309733 Hydrangea macrophylla
Hma1.2p1_1975F.1_g309735 Hydrangea macrophylla
Hund12522 Selenicereus undatus
Lalb_Chr02g0159781 Lupinus albus
Lalb_Chr21g0319281 Lupinus albus
Lalb_Chr23g0273111 Lupinus albus
Lj1g0013481 Lotus japonicus
Lj2g0028002 Lotus japonicus
Lj5P121T25 Lonicera japonica
Lju41C30T3 Lonicera japonica
Lsat_1_v5_gn_4_180900 Lactuca sativa
Lsat_1_v5_gn_4_73401 Lactuca sativa
Manes.06G100900 Manihot esculenta
Manes.17G117900 Manihot esculenta
Mapoly0001s0138 Marchantia polymorpha
MBI14_g12775_MAGBIO Magnolia biondii
MBI14_g26990_MAGBIO Magnolia biondii
MD06G1180900 Malus domestica
MD09G1039200 Malus domestica
MD13G1198500 Malus domestica
MD14G1186000 Malus domestica
MD17G1040200 Malus domestica
Medtr3g078340 Medicago truncatula
Medtr6g008170 Medicago truncatula
MELO3C002240.2 Cucumis melo
MELO3C017121.2 Cucumis melo
MELO3C033545.2 Cucumis melo
Migut.H00155 Erythranthe guttata
Migut.I00054 Erythranthe guttata
MSTRG.11424 Avicennia marina
MSTRG.23087 Avicennia marina
MSTRG.3193 Avicennia marina
MSTRG.3308 Avicennia marina
MSTRG.9664 Avicennia marina
Nitab4.5_0000002g0590 Nicotiana tabacum
Nitab4.5_0001286g0060 Nicotiana tabacum
Nitab4.5_0001642g0030 Nicotiana tabacum
Nitab4.5_0001952g0200 Nicotiana tabacum
Nitab4.5_0004753g0010 Nicotiana tabacum
Nitab4.5_0009842g0010 Nicotiana tabacum
Nn1g04516 Nelumbo nucifera
Nn2g14373 Nelumbo nucifera
Nn2g14494 Nelumbo nucifera
Nn2g14495 Nelumbo nucifera
Nn3g17002 Nelumbo nucifera
Nn3g18284 Nelumbo nucifera
Nn4g22910 Nelumbo nucifera
Oeu000118.1 Olea europaea
Oeu016336.1 Olea europaea
Oeu017866.1 Olea europaea
Oeu024666.1 Olea europaea
Oeu029383.1 Olea europaea
Oeu062374.1 Olea europaea
Os06g0238000 Oryza sativa ssp. japonica
Os06g0238200 Oryza sativa ssp. japonica
Os08g0421850 Oryza sativa ssp. japonica
Os09g0386200 Oryza sativa ssp. japonica
Peaxi162Scf00017g00256 Petunia axillaris
Peaxi162Scf00129g00084 Petunia axillaris
Peaxi162Scf00700g00630 Petunia axillaris
PGR044G1285 Punica granatum
PGR083G0164 Punica granatum
PGR142G0040 Punica granatum
PGSC0003DMG400000531 Solanum tuberosum
PGSC0003DMG400024471 Solanum tuberosum
Phvul.009G181600 Phaseolus vulgaris
Phvul.L001616 Phaseolus vulgaris
Potri.012G076400 Populus trichocarpa
Potri.015G071200 Populus trichocarpa
Potri.017G073400 Populus trichocarpa
Pp3c1_32770 Physcomitrium patens
Prupe.3G278800 Prunus persica
Prupe.5G178900 Prunus persica
Psat1g079480 Pisum sativum
Psat5g113720 Pisum sativum
PSO591G0006 Papaver somniferum
PSO832G0448 Papaver somniferum
QL02p078154 Quercus lobata
QL04p074245 Quercus lobata
QL10p012420 Quercus lobata
QL93p0205_0159 Quercus lobata
RcHm_v2.0_Chr2g0170361 Rosa chinensis
RcHm_v2.0_Chr7g0179681 Rosa chinensis
Rhsim10G0027900 Rhododendron simsii
Rhsim10G0028800 Rhododendron simsii
Rhsim12G0161800 Rhododendron simsii
Sabra15G0095200 Salix brachista
Sabra15G0096200 Salix brachista
Sabra17G0059900 Salix brachista
SalBow1G0771 Salvia bowleyana
SalBow3G1345 Salvia bowleyana
SalBow4G0222 Salvia bowleyana
SalBow5G3231 Salvia bowleyana
SalBow5G3323 Salvia bowleyana
Sc06g0002590 Simmondsia chinensis
Sc12g0005680 Simmondsia chinensis
Sed0002427 Sechium edule
Sed0004810 Sechium edule
Sed0008563 Sechium edule
SEGI_07098 Sequoiadendron giganteum
SEGI_12266 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34837 Striga asiatica
SGA_v2.0_scaffold467G52028 Striga asiatica
SHI06755 Sapria himalayana
SMO118G0100 Selaginella moellendorffii
Solyc02g087200.2 Solanum lycopersicum
Solyc03g113870.1 Solanum lycopersicum
Sopen02g031940 Solanum pennellii
Sopen03g032930 Solanum pennellii
Sp2g25730 Schrenkiella parvula
Sp2g28280 Schrenkiella parvula
Sp5g14140 Schrenkiella parvula
Sp7g01890 Schrenkiella parvula
TAR371G0029 Trochodendron aralioides
TAR371G1083 Trochodendron aralioides
TAR374G1711 Trochodendron aralioides
TAR375G0918 Trochodendron aralioides
TAR622G0531 Trochodendron aralioides
TAR626G1086 Trochodendron aralioides
TAR629G2717 Trochodendron aralioides
TAR629G3219 Trochodendron aralioides
THA.LOC104805417 Tarenaya hassleriana
THA.LOC104809257 Tarenaya hassleriana
THA.LOC104818251 Tarenaya hassleriana
THA.LOC104821440 Tarenaya hassleriana
Thecc.03G005000 Theobroma cacao
Thecc.04G003500 Theobroma cacao
Thhalv10003926m.g Eutrema salsugineum
Thhalv10003938m.g Eutrema salsugineum
Thhalv10010295m.g Eutrema salsugineum
Thhalv10027705m.g Eutrema salsugineum
TPR.G31466 Trifolium pratense
TPR.G35047 Trifolium pratense
TWI12G0963 Tripterygium wilfordii
TWI15G0958 Tripterygium wilfordii
TWI60G0942 Tripterygium wilfordii
unitig_37.g12742 Utricularia gibba
unitig_750.g28480 Utricularia gibba
unitig_750.g28481 Utricularia gibba
unitig_899.g15499 Utricularia gibba
vmacro05791 Vaccinium macrocarpon
VMungo0464G2176 Vigna mungo
VMungo1309G0204 Vigna mungo
VMungo1309G2649 Vigna mungo
Zm00001eb042000 Zea mays
Zm00001eb099030 Zea mays
Zm00001eb311800 Zea mays
Zm00001eb371890 Zea mays

User provided reference genes

Program Settings