Gene: Solyc02g087200.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087200.2
  • Transcript Identifier Solyc02g087200.2.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 47680279-47681568 : negative

Gene Family Information

  • ID HOM05D002131
  • #Genes/#Species 314/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087200.2.1
  • uniprot A0A3Q7FW62
  • gene_id Solyc02g087200

Descriptions

  • Description RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XIC9_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT5G40140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR003613 U box domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR016024 Armadillo-type fold
IPR000225 Armadillo
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase