Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p21820 Brassica napus
A08p07460 Brassica napus
A09p19130 Brassica napus
Aa31LG6G9720 Aethionema arabicum
Aa31LG9G12350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1470 Anthoceros agrestis
Actinidia01150 Actinidia chinensis
Actinidia29523 Actinidia chinensis
Ah.05g167780 Amaranthus hybridus
Ah.06g181900 Amaranthus hybridus
Ah.06g181950 Amaranthus hybridus
Ah.06g181990 Amaranthus hybridus
Ah.06g182030 Amaranthus hybridus
AL1G51830 Arabidopsis lyrata
Aqoxy5G02130 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0G9BI5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1CLD3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2WK1A7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ELH3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.41DJP9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67BWTQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.93HII2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI1DXZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ARB3KQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8AVXR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DH627J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7PKRF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F4NS5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG679C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I00TBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K144IY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K519JC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LN4C9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RK7RJ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VA88WB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VI2UWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XUN6R5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1T38L Arachis hypogaea
AT1G43710 Arabidopsis thaliana
ATR0772G131 Amborella trichopoda
ATR0786G001 Amborella trichopoda
ATR0820G195 Amborella trichopoda
Atru.chr13.2193 Acer truncatum
AUR62013549 Chenopodium quinoa
AUR62019033 Chenopodium quinoa
AUR62025038 Chenopodium quinoa
AUR62026732 Chenopodium quinoa
AUR62027867 Chenopodium quinoa
AUR62027868 Chenopodium quinoa
AUR62030245 Chenopodium quinoa
AUR62039326 Chenopodium quinoa
BcaB02g11372 Brassica carinata
BcaB02g11373 Brassica carinata
BcaB04g17750 Brassica carinata
BcaB07g31119 Brassica carinata
BcaB07g33978 Brassica carinata
BcaC04g22043 Brassica carinata
BcaC05g27668 Brassica carinata
BcaC07g37442 Brassica carinata
BolC5t32392H Brassica oleracea
BolC8t47765H Brassica oleracea
BolC9t55331H Brassica oleracea
BraA05t21103Z Brassica rapa
BraA08t32760Z Brassica rapa
BraA09t37531Z Brassica rapa
C05p36530 Brassica napus
C08p09160 Brassica napus
C09p24130 Brassica napus
CAN.G1117.1 Capsicum annuum
CAN.G1295.2 Capsicum annuum
CAN.G1295.4 Capsicum annuum
CAN.G175.4 Capsicum annuum
CAN.G20.18 Capsicum annuum
CAN.G21.24 Capsicum annuum
CAN.G21.25 Capsicum annuum
CAN.G21.47 Capsicum annuum
CAN.G231.9 Capsicum annuum
CANSAT25G1491 Cannabis sativa
CARHR035550 Cardamine hirsuta
Carub.0001s3473 Capsella rubella
Ca_00109_v3 Cicer arietinum L.
Ca_19932_v3 Cicer arietinum L.
Ca_23021_v3 Cicer arietinum L.
CBR_g24274 Chara braunii
CBR_g24393 Chara braunii
CBR_g40956 Chara braunii
Cc10_g14560 Coffea canephora
CDE06G0991 Ceratophyllum demersum
CDE08G0925 Ceratophyllum demersum
Cfa005574 Carpinus fangiana
Ciclev10000775m.g Citrus clementina
CiPaw.15G017300 Carya illinoinensis
CiPaw.16G014200 Carya illinoinensis
ClCG08G006920 Citrullus lanatus
COL.COLO4_24673 Corchorus olitorius
Cpa.g.sc21.183 Carica papaya
Cre01.g038250 Chlamydomonas reinhardtii
CsaV3_1G019620 Cucumis sativus L.
CsaV3_1G019630 Cucumis sativus L.
CsaV3_6G005330 Cucumis sativus L.
CSS0000714 Camellia sinensis var. sinensis
CSS0015648 Camellia sinensis var. sinensis
CSS0024937 Camellia sinensis var. sinensis
CSS0040629 Camellia sinensis var. sinensis
CSS0043348 Camellia sinensis var. sinensis
CSS0049130 Camellia sinensis var. sinensis
DCAR_001810 Daucus carota
DCAR_014427 Daucus carota
DCAR_029220 Daucus carota
Dinv24238 Davidia involucrata
Dinv41095 Davidia involucrata
Dinv41096 Davidia involucrata
Duzib041G0595 Durio zibethinus
Duzib116G0266 Durio zibethinus
ECA234G2739 Erigeron canadensis
EL10Ac1g01518 Beta vulgaris
EL10Ac4g07656 Beta vulgaris
EL10Ac4g07657 Beta vulgaris
EL10Ac4g07659 Beta vulgaris
Eucgr.F04254 Eucalyptus grandis
Eucgr.F04257 Eucalyptus grandis
Eucgr.L02502 Eucalyptus grandis
Eucgr.L03344 Eucalyptus grandis
FAN15G0585 Fragaria x ananassa
FAN20G2508 Fragaria x ananassa
FAN24G3281 Fragaria x ananassa
FvH4_1g24740 Fragaria vesca
FvH4_2g14160 Fragaria vesca
Glyma.08G076400 Glycine max
Glyma.08G181700 Glycine max
Glyma.10G226100 Glycine max
Glyma.10G226200 Glycine max
Glyma.10G227600 Glycine max
Glyma.11G156901 Glycine max
Glyma.15G050600 Glycine max
Glyma.18G290500 Glycine max
Gohir.A01G197700 Gossypium hirsutum
Gohir.A05G242800 Gossypium hirsutum
Gohir.D01G187900 Gossypium hirsutum
Gohir.D05G244300 Gossypium hirsutum
Gorai.002G231300 Gossypium raimondii
Gorai.009G253400 Gossypium raimondii
GSVIVG01034903001 Vitis vinifera
HanXRQChr10g0293251 Helianthus annuus
Haze_10790 Corylus avellana
Haze_17741 Corylus avellana
Hma1.2p1_0217F.1_g091530 Hydrangea macrophylla
HPP92_026235 Vanilla planifolia
Hund11241 Selenicereus undatus
Hund11243 Selenicereus undatus
Lalb_Chr20g0123211 Lupinus albus
Lj3g0024571 Lotus japonicus
Lj4g0007032 Lotus japonicus
Lj5g0000919 Lotus japonicus
Lj5g0003472 Lotus japonicus
Lj5g0009055 Lotus japonicus
Lj5g0015852 Lotus japonicus
Lj5g0025532 Lotus japonicus
Lj6g0012345 Lotus japonicus
Lj6g0013354 Lotus japonicus
Lj7C371G11 Lonicera japonica
Lj9C317T2 Lonicera japonica
Lsat_1_v5_gn_5_106560 Lactuca sativa
Lsat_1_v5_gn_5_106640 Lactuca sativa
Lsat_1_v5_gn_6_4821 Lactuca sativa
Manes.02G177900 Manihot esculenta
Manes.18G090400 Manihot esculenta
Manes.18G090416 Manihot esculenta
Mapoly0067s0048 Marchantia polymorpha
MBI11_g10321_MAGBIO Magnolia biondii
MBI12_g36304_MAGBIO Magnolia biondii
MD05G1021600 Malus domestica
MD10G1023600 Malus domestica
Medtr1g099020 Medicago truncatula
Medtr1g099040 Medicago truncatula
Medtr1g099050 Medicago truncatula
Medtr1g099085 Medicago truncatula
Medtr2g007900 Medicago truncatula
Medtr2g008100 Medicago truncatula
Medtr2g008120 Medicago truncatula
Medtr4g076700 Medicago truncatula
Medtr4g076720 Medicago truncatula
Medtr4g076750 Medicago truncatula
Medtr6g071985 Medicago truncatula
Medtr6g071990 Medicago truncatula
Medtr6g071995 Medicago truncatula
MELO3C008357.2 Cucumis melo
Migut.B00885 Erythranthe guttata
Migut.C01009 Erythranthe guttata
Migut.E01053 Erythranthe guttata
Migut.E01453 Erythranthe guttata
Migut.E01678 Erythranthe guttata
MSTRG.1357 Avicennia marina
MSTRG.24212 Avicennia marina
MSTRG.25315 Avicennia marina
Nitab4.5_0000032g0410 Nicotiana tabacum
Nitab4.5_0000264g0190 Nicotiana tabacum
Nitab4.5_0000318g0220 Nicotiana tabacum
Nitab4.5_0000318g0230 Nicotiana tabacum
Nitab4.5_0000406g0050 Nicotiana tabacum
Nitab4.5_0000865g0040 Nicotiana tabacum
Nitab4.5_0001736g0020 Nicotiana tabacum
Nitab4.5_0001736g0040 Nicotiana tabacum
Nitab4.5_0002989g0010 Nicotiana tabacum
Nitab4.5_0003338g0110 Nicotiana tabacum
Nitab4.5_0004908g0060 Nicotiana tabacum
Nitab4.5_0004957g0010 Nicotiana tabacum
Nitab4.5_0006202g0040 Nicotiana tabacum
Nitab4.5_0007228g0030 Nicotiana tabacum
Nitab4.5_0029410g0010 Nicotiana tabacum
Nn1g06118 Nelumbo nucifera
Nn5g28703 Nelumbo nucifera
Oeu010072.1 Olea europaea
Oeu019811.1 Olea europaea
Oeu019813.1 Olea europaea
Oeu041544.1 Olea europaea
Os02g0541300 Oryza sativa ssp. japonica
Os02g0541325 Oryza sativa ssp. japonica
Os10g0105700 Oryza sativa ssp. japonica
Os11g0473832 Oryza sativa ssp. japonica
Peaxi162Scf00045g02025 Petunia axillaris
Peaxi162Scf00045g02038 Petunia axillaris
Peaxi162Scf00523g00522 Petunia axillaris
Peaxi162Scf00523g00526 Petunia axillaris
Peaxi162Scf00699g00323 Petunia axillaris
Peaxi162Scf00699g00324 Petunia axillaris
Peaxi162Scf00699g00325 Petunia axillaris
Peaxi162Scf00822g00047 Petunia axillaris
Peaxi162Scf00822g00314 Petunia axillaris
Peaxi162Scf00822g00315 Petunia axillaris
Peaxi162Scf01292g00029 Petunia axillaris
Peaxi162Scf49902g00003 Petunia axillaris
PGR042G2484 Punica granatum
PGR044G1439 Punica granatum
PGR122G0002 Punica granatum
PGSC0003DMG400000785 Solanum tuberosum
PGSC0003DMG400006731 Solanum tuberosum
PGSC0003DMG400007489 Solanum tuberosum
PGSC0003DMG400007631 Solanum tuberosum
PGSC0003DMG400010839 Solanum tuberosum
PGSC0003DMG400013910 Solanum tuberosum
PGSC0003DMG400014731 Solanum tuberosum
PGSC0003DMG400014779 Solanum tuberosum
PGSC0003DMG400020035 Solanum tuberosum
PGSC0003DMG400023229 Solanum tuberosum
PGSC0003DMG400026280 Solanum tuberosum
PGSC0003DMG400026300 Solanum tuberosum
PGSC0003DMG400029046 Solanum tuberosum
PGSC0003DMG400029050 Solanum tuberosum
PGSC0003DMG400029122 Solanum tuberosum
PGSC0003DMG400031502 Solanum tuberosum
Phvul.002G204900 Phaseolus vulgaris
Phvul.006G209300 Phaseolus vulgaris
Potri.002G069800 Populus trichocarpa
Potri.005G190500 Populus trichocarpa
Pp3c3_22850 Physcomitrium patens
Pp3c4_17670 Physcomitrium patens
PRCOL_00003181 Prasinoderma coloniale
Prupe.1G560500 Prunus persica
Prupe.8G026000 Prunus persica
Psat0s5615g0040 Pisum sativum
Psat1g219160 Pisum sativum
Psat3g006160 Pisum sativum
Psat5g232440 Pisum sativum
Psat6g193840 Pisum sativum
PSO017G3815 Papaver somniferum
PSO210G1610 Papaver somniferum
PSO210G4348 Papaver somniferum
PSO210G5789 Papaver somniferum
PSO210G7762 Papaver somniferum
PSO541G6191 Papaver somniferum
PSO675G2652 Papaver somniferum
PSO675G7025 Papaver somniferum
QL02p024176 Quercus lobata
QL11p018632 Quercus lobata
RcHm_v2.0_Chr6g0276311 Rosa chinensis
Sabra02G0054500 Salix brachista
Sabra05G0145600 Salix brachista
SalBow7G0219 Salvia bowleyana
SalBow7G0602 Salvia bowleyana
Sc02g0004210 Simmondsia chinensis
Sed0000235 Sechium edule
Sed0002939 Sechium edule
Sed0006775 Sechium edule
Sed0008031 Sechium edule
SEGI_24105 Sequoiadendron giganteum
SGA_v2.0_scaffold48G17975 Striga asiatica
SGA_v2.0_scaffold4G02168 Striga asiatica
SGA_v2.0_scaffold611G53185 Striga asiatica
SHI09286 Sapria himalayana
SMO174G0152 Selaginella moellendorffii
Solyc04g071140.3 Solanum lycopersicum
Solyc07g041260.3 Solanum lycopersicum
Solyc07g041960.2 Solanum lycopersicum
Solyc07g043205.1 Solanum lycopersicum
Solyc08g006740.3 Solanum lycopersicum
Solyc08g006750.4 Solanum lycopersicum
Solyc08g016770.4 Solanum lycopersicum
Solyc08g066220.4 Solanum lycopersicum
Solyc08g066240.3 Solanum lycopersicum
Solyc08g066250.4 Solanum lycopersicum
Solyc08g066260.3 Solanum lycopersicum
Solyc08g068600.3 Solanum lycopersicum
Solyc08g068610.3 Solanum lycopersicum
Solyc08g068620.3 Solanum lycopersicum
Solyc08g068630.4 Solanum lycopersicum
Solyc08g068640.4 Solanum lycopersicum
Solyc08g068660.1 Solanum lycopersicum
Solyc08g068665.1 Solanum lycopersicum
Solyc08g068680.4 Solanum lycopersicum
Solyc12g062790.1 Solanum lycopersicum
Sopen04g027090 Solanum pennellii
Sopen08g002680 Solanum pennellii
Sopen08g002690 Solanum pennellii
Sopen08g007370 Solanum pennellii
Sopen08g019910 Solanum pennellii
Sopen08g019960 Solanum pennellii
Sopen08g019970 Solanum pennellii
Sopen08g019990 Solanum pennellii
Sopen08g020010 Solanum pennellii
Sopen08g020020 Solanum pennellii
Sopen08g020050 Solanum pennellii
Sopen08g022360 Solanum pennellii
Sopen08g022370 Solanum pennellii
Sopen08g022380 Solanum pennellii
Sopen08g022390 Solanum pennellii
Sopen08g022400 Solanum pennellii
Sopen08g022420 Solanum pennellii
Sopen08g022430 Solanum pennellii
Sp1g32730 Schrenkiella parvula
TAR381G1207 Trochodendron aralioides
TAR628G0024 Trochodendron aralioides
THA.LOC104798877 Tarenaya hassleriana
THA.LOC104806853 Tarenaya hassleriana
Thecc.08G149200 Theobroma cacao
Thhalv10011430m.g Eutrema salsugineum
TPR.G10146 Trifolium pratense
TPR.G17986 Trifolium pratense
TPR.G19722 Trifolium pratense
TPR.G30023 Trifolium pratense
TWI32G0250 Tripterygium wilfordii
TWI34G1384 Tripterygium wilfordii
TWI60G1232 Tripterygium wilfordii
unitig_26.g9288 Utricularia gibba
VMungo0251G0917 Vigna mungo
VMungo0540G1676 Vigna mungo
VMungo0720G1774 Vigna mungo
VMungo0720G2055 Vigna mungo
VMungo1215G0450 Vigna mungo
Zm00001eb181690 Zea mays
Zm00001eb243180 Zea mays

User provided reference genes

Program Settings