Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27280 Brassica napus
A03p51530 Brassica napus
A07p16560 Brassica napus
A08p05880 Brassica napus
A10p06560 Brassica napus
Aa31LG1G15880 Aethionema arabicum
Aa31LG6G14280 Aethionema arabicum
Aa31LG6G1500 Aethionema arabicum
Aa31LG7G13750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.518 Anthoceros agrestis
Actinidia10175 Actinidia chinensis
Actinidia10176 Actinidia chinensis
Actinidia16448 Actinidia chinensis
Actinidia21242 Actinidia chinensis
Actinidia22671 Actinidia chinensis
Actinidia32814 Actinidia chinensis
Actinidia36450 Actinidia chinensis
Ah.03g146200 Amaranthus hybridus
Ah.05g167160 Amaranthus hybridus
Ah.11g042900 Amaranthus hybridus
AL1G53380 Arabidopsis lyrata
AL4G13010 Arabidopsis lyrata
AL7G35460 Arabidopsis lyrata
AL8G44000 Arabidopsis lyrata
Aqoxy6G02818 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25DMGV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79RMIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZ1RGH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K0A0HQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY8NQV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TDQ3HL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TIU0MY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V65WV3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHC3ET Arachis hypogaea
AT1G47240 Arabidopsis thaliana
AT2G23150 Arabidopsis thaliana
AT4G18790 Arabidopsis thaliana
AT5G67330 Arabidopsis thaliana
ATR0661G042 Amborella trichopoda
Atru.chr13.791 Acer truncatum
Atru.chr3.220 Acer truncatum
Atru.chr3.231 Acer truncatum
AUR62003953 Chenopodium quinoa
AUR62024545 Chenopodium quinoa
AUR62037446 Chenopodium quinoa
AUR62038266 Chenopodium quinoa
AUR62038780 Chenopodium quinoa
AUR62038787 Chenopodium quinoa
BcaB04g17543 Brassica carinata
BcaB07g33851 Brassica carinata
BcaC01g04872 Brassica carinata
BcaC07g37232 Brassica carinata
BcaC07g41003 Brassica carinata
BcaC08g42933 Brassica carinata
BcaNung02674 Brassica carinata
BolC3t15614H Brassica oleracea
BolC6t35301H Brassica oleracea
BolC7t42954H Brassica oleracea
BolC7t45501H Brassica oleracea
BolC8t47499H Brassica oleracea
BolC8t51576H Brassica oleracea
BraA03t11939Z Brassica rapa
BraA03t14236Z Brassica rapa
BraA07t29380Z Brassica rapa
BraA08t32590Z Brassica rapa
BraA09t41098Z Brassica rapa
BraA10t42917Z Brassica rapa
C03p32790 Brassica napus
C06p01730 Brassica napus
C07p24250 Brassica napus
C07p49980 Brassica napus
C08p06530 Brassica napus
C08p40050 Brassica napus
CAN.G1054.11 Capsicum annuum
CAN.G1054.12 Capsicum annuum
CAN.G1823.2 Capsicum annuum
CANSAT01G1696 Cannabis sativa
CARHR036780 Cardamine hirsuta
CARHR114360 Cardamine hirsuta
CARHR225640 Cardamine hirsuta
CARHR280280 Cardamine hirsuta
Carub.0001s3601 Capsella rubella
Carub.0004s0237 Capsella rubella
Carub.0007s2245 Capsella rubella
Carub.0008s2716 Capsella rubella
Ca_11706_v3 Cicer arietinum L.
Ca_15921_v3 Cicer arietinum L.
Ca_22119_v3 Cicer arietinum L.
Ca_24716_v3 Cicer arietinum L.
Ca_24731_v3 Cicer arietinum L.
Ca_29995_v3 Cicer arietinum L.
Cc07_g06630 Coffea canephora
Cc10_g05410 Coffea canephora
Cc10_g05440 Coffea canephora
CDE02G4170 Ceratophyllum demersum
CDE04G1690 Ceratophyllum demersum
CDE04G2875 Ceratophyllum demersum
CDE06G0654 Ceratophyllum demersum
Cfa004082 Carpinus fangiana
Cfa017884 Carpinus fangiana
Ciclev10000826m.g Citrus clementina
Ciclev10025394m.g Citrus clementina
CiPaw.01G009000 Carya illinoinensis
CiPaw.02G005200 Carya illinoinensis
CiPaw.15G046500 Carya illinoinensis
ClCG02G008270 Citrullus lanatus
COL.COLO4_11511 Corchorus olitorius
COL.COLO4_28553 Corchorus olitorius
Cpa.g.sc21.126 Carica papaya
Cpa.g.sc6.70 Carica papaya
Cre05.g248300 Chlamydomonas reinhardtii
CsaV3_2G035360 Cucumis sativus L.
CSS0004419 Camellia sinensis var. sinensis
CSS0021034 Camellia sinensis var. sinensis
CSS0022297 Camellia sinensis var. sinensis
CSS0025380 Camellia sinensis var. sinensis
CSS0040280 Camellia sinensis var. sinensis
CSS0041547 Camellia sinensis var. sinensis
CSS0041748 Camellia sinensis var. sinensis
CSS0044220 Camellia sinensis var. sinensis
CSS0045413 Camellia sinensis var. sinensis
CSS0047249 Camellia sinensis var. sinensis
DCAR_012773 Daucus carota
DCAR_020083 Daucus carota
DCAR_025769 Daucus carota
DCAR_030891 Daucus carota
Dinv26885 Davidia involucrata
Dinv30052 Davidia involucrata
Dinv39250 Davidia involucrata
Dinv44991 Davidia involucrata
Duzib093G1780 Durio zibethinus
Duzib187G0181 Durio zibethinus
Duzib264G0981 Durio zibethinus
ECA232G1768 Erigeron canadensis
ECA238G2400 Erigeron canadensis
ECA247G2324 Erigeron canadensis
ECA247G3156 Erigeron canadensis
EL10Ac6g15674 Beta vulgaris
EL10As7g23820 Beta vulgaris
EL10As7g23821 Beta vulgaris
Eucgr.F00133 Eucalyptus grandis
Eucgr.F02273 Eucalyptus grandis
Eucgr.H02266 Eucalyptus grandis
Eucgr.I00738 Eucalyptus grandis
FAN15G1111 Fragaria x ananassa
FAN19G2199 Fragaria x ananassa
FAN20G2703 Fragaria x ananassa
FAN23G1771 Fragaria x ananassa
FAN23G1806 Fragaria x ananassa
FAN24G3163 Fragaria x ananassa
FAN26G1805 Fragaria x ananassa
FAN27G0164 Fragaria x ananassa
FAN28G0892 Fragaria x ananassa
FvH4_1g17000 Fragaria vesca
FvH4_2g33450 Fragaria vesca
Glyma.01G190700 Glycine max
Glyma.04G044000 Glycine max
Glyma.05G101700 Glycine max
Glyma.06G044200 Glycine max
Glyma.07G058900 Glycine max
Glyma.11G051500 Glycine max
Glyma.16G027800 Glycine max
Glyma.17G165200 Glycine max
Gohir.A02G154400 Gossypium hirsutum
Gohir.A05G207200 Gossypium hirsutum
Gohir.A11G218900 Gossypium hirsutum
Gohir.A12G068533 Gossypium hirsutum
Gohir.D03G026100 Gossypium hirsutum
Gohir.D05G210600 Gossypium hirsutum
Gohir.D11G204800 Gossypium hirsutum
Gohir.D12G072300 Gossypium hirsutum
Gorai.003G027800 Gossypium raimondii
Gorai.007G219700 Gossypium raimondii
Gorai.008G079600 Gossypium raimondii
Gorai.009G217100 Gossypium raimondii
GSVIVG01000173001 Vitis vinifera
GSVIVG01009387001 Vitis vinifera
HanXRQChr02g0039961 Helianthus annuus
HanXRQChr09g0264491 Helianthus annuus
HanXRQChr11g0322531 Helianthus annuus
HanXRQChr14g0449551 Helianthus annuus
Haze_15332 Corylus avellana
Haze_18282 Corylus avellana
Hma1.2p1_0239F.1_g099900 Hydrangea macrophylla
HPP92_015905 Vanilla planifolia
HPP92_023680 Vanilla planifolia
HPP92_023697 Vanilla planifolia
Hund13921 Selenicereus undatus
Hund16372 Selenicereus undatus
Hund24090 Selenicereus undatus
Lalb_Chr04g0254571 Lupinus albus
Lalb_Chr05g0226091 Lupinus albus
Lalb_Chr08g0245461 Lupinus albus
Lalb_Chr16g0389021 Lupinus albus
Lj1g0010352 Lotus japonicus
Lj2g0026146 Lotus japonicus
Lj3g0018464 Lotus japonicus
Lj4A158T48 Lonicera japonica
Lj4A761G89 Lonicera japonica
Lj4C67T4 Lonicera japonica
Lj4C67T6 Lonicera japonica
Lj4g0006179 Lotus japonicus
Lj4g0006500 Lotus japonicus
Lj4g0025852 Lotus japonicus
Lj7A85T50 Lonicera japonica
Lsat_1_v5_gn_1_23421 Lactuca sativa
Lsat_1_v5_gn_1_23561 Lactuca sativa
Lsat_1_v5_gn_2_84661 Lactuca sativa
Lsat_1_v5_gn_4_163180 Lactuca sativa
Manes.05G179600 Manihot esculenta
Manes.12G109500 Manihot esculenta
Manes.13G115900 Manihot esculenta
Mapoly0115s0033 Marchantia polymorpha
MBI16_g14439_MAGBIO Magnolia biondii
MD02G1180400 Malus domestica
MD08G1089600 Malus domestica
MD15G1074200 Malus domestica
MD15G1291300 Malus domestica
Medtr3g102620 Medicago truncatula
Medtr4g095075 Medicago truncatula
Medtr5g016270 Medicago truncatula
Medtr8g028050 Medicago truncatula
MELO3C019215.2 Cucumis melo
Migut.C00511 Erythranthe guttata
Migut.H00380 Erythranthe guttata
Migut.N02760 Erythranthe guttata
MSTRG.1046 Avicennia marina
MSTRG.24360 Avicennia marina
MSTRG.2842 Avicennia marina
Nitab4.5_0000934g0200 Nicotiana tabacum
Nitab4.5_0001119g0080 Nicotiana tabacum
Nitab4.5_0001439g0070 Nicotiana tabacum
Nitab4.5_0003564g0050 Nicotiana tabacum
Nitab4.5_0003564g0060 Nicotiana tabacum
Nn1g04651 Nelumbo nucifera
Nn5g30472 Nelumbo nucifera
Oeu011607.1 Olea europaea
Oeu013274.1 Olea europaea
Oeu021183.1 Olea europaea
Oeu022064.1 Olea europaea
Oeu022065.2 Olea europaea
Oeu044312.3 Olea europaea
Os01g0733001 Oryza sativa ssp. japonica
Os03g0208500 Oryza sativa ssp. japonica
Os03g0607400 Oryza sativa ssp. japonica
Os12g0581600 Oryza sativa ssp. japonica
Peaxi162Scf00081g00064 Petunia axillaris
Peaxi162Scf00081g00618 Petunia axillaris
Peaxi162Scf00081g00716 Petunia axillaris
Peaxi162Scf00264g00512 Petunia axillaris
PGR004G2325 Punica granatum
PGR031G0382 Punica granatum
PGR031G3938 Punica granatum
PGR083G2589 Punica granatum
PGR102G0773 Punica granatum
PGSC0003DMG400021539 Solanum tuberosum
PGSC0003DMG400023310 Solanum tuberosum
PGSC0003DMG400024976 Solanum tuberosum
Phvul.002G014300 Phaseolus vulgaris
Phvul.003G238600 Phaseolus vulgaris
Phvul.009G069700 Phaseolus vulgaris
Phvul.010G110500 Phaseolus vulgaris
Potri.002G121000 Populus trichocarpa
Potri.007G050600 Populus trichocarpa
Potri.007G050700 Populus trichocarpa
Pp3c1_10690 Physcomitrium patens
Pp3c2_37310 Physcomitrium patens
Pp3c4_30390 Physcomitrium patens
Pp3c7_20820 Physcomitrium patens
Prupe.1G427000 Prunus persica
Prupe.6G225900 Prunus persica
Psat0s1036g0040 Pisum sativum
Psat2g169480 Pisum sativum
Psat4g158560 Pisum sativum
Psat5g039760 Pisum sativum
PSO063G2606 Papaver somniferum
PSO541G1274 Papaver somniferum
PSO675G0164 Papaver somniferum
PSO832G2532 Papaver somniferum
QL02p002551 Quercus lobata
QL02p002596 Quercus lobata
RcHm_v2.0_Chr2g0107161 Rosa chinensis
RcHm_v2.0_Chr6g0309081 Rosa chinensis
Rhsim06G0058600 Rhododendron simsii
Rhsim06G0058700 Rhododendron simsii
Rhsim08G0096700 Rhododendron simsii
Sabra02G0095200 Salix brachista
Sabra07G0044900 Salix brachista
SalBow1G7996 Salvia bowleyana
SalBow6G0852 Salvia bowleyana
SalBow8G2694 Salvia bowleyana
Sc02g0007680 Simmondsia chinensis
Sc16g0001510 Simmondsia chinensis
Sc16g0004900 Simmondsia chinensis
Sc26g0004080 Simmondsia chinensis
Sed0000632 Sechium edule
Sed0007055 Sechium edule
SEGI_01153 Sequoiadendron giganteum
SEGI_28976 Sequoiadendron giganteum
SEGI_38634 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06949 Striga asiatica
SGA_v2.0_scaffold15G07397 Striga asiatica
SGA_v2.0_scaffold259G45809 Striga asiatica
SGA_v2.0_scaffold28G11815 Striga asiatica
SHI08366 Sapria himalayana
SHI28516 Sapria himalayana
SHI28526 Sapria himalayana
SMO171G0014 Selaginella moellendorffii
Solyc02g092800.3 Solanum lycopersicum
Solyc04g078230.1 Solanum lycopersicum
Solyc04g078250.4 Solanum lycopersicum
Sopen02g037350 Solanum pennellii
Sopen04g031840 Solanum pennellii
Sopen04g031850 Solanum pennellii
Sp1g34360 Schrenkiella parvula
Sp2g29330 Schrenkiella parvula
Sp4g02210 Schrenkiella parvula
Sp7g17490 Schrenkiella parvula
TAR381G0062 Trochodendron aralioides
TAR625G0809 Trochodendron aralioides
THA.LOC104806165 Tarenaya hassleriana
THA.LOC104807617 Tarenaya hassleriana
THA.LOC104812583 Tarenaya hassleriana
THA.LOC104819249 Tarenaya hassleriana
THA.LOC104820503 Tarenaya hassleriana
THA.LOC104821237 Tarenaya hassleriana
Thecc.01G066400 Theobroma cacao
Thecc.08G093500 Theobroma cacao
Thhalv10000132m.g Eutrema salsugineum
Thhalv10004033m.g Eutrema salsugineum
Thhalv10011381m.g Eutrema salsugineum
Thhalv10026903m.g Eutrema salsugineum
TPR.G23885 Trifolium pratense
TPR.G25576 Trifolium pratense
TPR.G26881 Trifolium pratense
TPR.G30461 Trifolium pratense
TPR.G38306 Trifolium pratense
TWI09G0085 Tripterygium wilfordii
TWI09G1041 Tripterygium wilfordii
TWI36G0259 Tripterygium wilfordii
TWI53G1592 Tripterygium wilfordii
unitig_21.g20636 Utricularia gibba
unitig_578.g16134 Utricularia gibba
unitig_899.g14575 Utricularia gibba
vmacro17980 Vaccinium macrocarpon
vmacro21462 Vaccinium macrocarpon
vmacro21463 Vaccinium macrocarpon
VMungo0251G3778 Vigna mungo
VMungo0331G1628 Vigna mungo
VMungo1215G2934 Vigna mungo
VMungo1309G0749 Vigna mungo
Zm00001eb030050 Zea mays
Zm00001eb051790 Zea mays
Zm00001eb400560 Zea mays

User provided reference genes

Program Settings