Gene: Solyc04g078250.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g078250.4
- Transcript Identifier Solyc04g078250.4.1
- Gene Type Coding gene
- Location SL4.0ch04 : 61007533-61011330 : negative
Gene Family Information
- ID HOM05D000702
- #Genes/#Species 815/100
- Phylogenetic origin
- ID ORTHO05D001796
- #Genes/#Species 354/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc04g078250.4.1
- uniprot A0A3Q7G9X8
- gene_id Solyc04g078250
Descriptions
- Description metal transporter Nramp2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030001 | IEA | GOA Database | metal ion transport | |
| GO:0030001 | IEA | InterPro | metal ion transport | |
| GO:0051512 | ISO | PLAZA Integrative Orthology | positive regulation of unidimensional cell growth | AT1G47240 |
| GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT1G47240 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT1G47240 |
| GO:0071287 | ISO | PLAZA Integrative Orthology | cellular response to manganese ion | AT1G47240 |
| GO:0006828 | ISO | PLAZA Integrative Orthology | manganese ion transport | AT1G47240 |
| GO:0071421 | IEA | GOA Database | manganese ion transmembrane transport | |
| GO:0070574 | IEA | GOA Database | cadmium ion transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005384 | IBA | GOA Database | manganese ion transmembrane transporter activity | |
| GO:0015086 | IBA | GOA Database | cadmium ion transmembrane transporter activity | |
| GO:0046873 | IEA | GOA Database | metal ion transmembrane transporter activity | |
| GO:0046873 | IEA | InterPro | metal ion transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G47240 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001046 | NRAMP family |
| Mapman id | Description |
|---|---|
| 24.2.3.10 | Solute transport.carrier-mediated transport.APC superfamily.metal cation transporter (NRAMP) |